Gene Bphyt_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3425 
Symbol 
ID6281841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3856097 
End bp3856552 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content63% 
IMG OID642622998 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001897039 
Protein GI187925397 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.112625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAC TGCTGGTACT GCACGGCCCC AACCTCAACC TTCTCGGCAC CCGGGAACCC 
GAGGTCTACG GTCGCGTGAC CTTACCGCAG ATCGATCAAG CGCTGGCGGA CCGCGCAGCG
GACGCAGGCG TCGAACTCGC GTCGTTCCAG AGCAATCACG AAGGCGCTCT GGTGGACCGC
ATTCAATCCG CGCGGACTGA ACAAACCGAT TTCATTCTGA TCAATCCCGC CGCGTACACG
CACACCAGCG TGGCCATTCG GGACGCACTG GCGGGGGTCG GCATCCCGTT CGTCGAGATT
CATCTGTCGA ACGTGCATCG TCGCGAACCG TTCCGGCATC ACTCGTATTT CTCCGACCAG
GCTGAGGGCG TGATTTGCGG CCTCGGCTGG AAGGGATATC TGTACGCGCT CGAATTCGCG
CTCGACCGGC TTTCCGCCGG CTCGTCGCGC GGCTGA
 
Protein sequence
MTRLLVLHGP NLNLLGTREP EVYGRVTLPQ IDQALADRAA DAGVELASFQ SNHEGALVDR 
IQSARTEQTD FILINPAAYT HTSVAIRDAL AGVGIPFVEI HLSNVHRREP FRHHSYFSDQ
AEGVICGLGW KGYLYALEFA LDRLSAGSSR G