Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3425 |
Symbol | |
ID | 6281841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3856097 |
End bp | 3856552 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622998 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001897039 |
Protein GI | 187925397 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.112625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGAC TGCTGGTACT GCACGGCCCC AACCTCAACC TTCTCGGCAC CCGGGAACCC GAGGTCTACG GTCGCGTGAC CTTACCGCAG ATCGATCAAG CGCTGGCGGA CCGCGCAGCG GACGCAGGCG TCGAACTCGC GTCGTTCCAG AGCAATCACG AAGGCGCTCT GGTGGACCGC ATTCAATCCG CGCGGACTGA ACAAACCGAT TTCATTCTGA TCAATCCCGC CGCGTACACG CACACCAGCG TGGCCATTCG GGACGCACTG GCGGGGGTCG GCATCCCGTT CGTCGAGATT CATCTGTCGA ACGTGCATCG TCGCGAACCG TTCCGGCATC ACTCGTATTT CTCCGACCAG GCTGAGGGCG TGATTTGCGG CCTCGGCTGG AAGGGATATC TGTACGCGCT CGAATTCGCG CTCGACCGGC TTTCCGCCGG CTCGTCGCGC GGCTGA
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Protein sequence | MTRLLVLHGP NLNLLGTREP EVYGRVTLPQ IDQALADRAA DAGVELASFQ SNHEGALVDR IQSARTEQTD FILINPAAYT HTSVAIRDAL AGVGIPFVEI HLSNVHRREP FRHHSYFSDQ AEGVICGLGW KGYLYALEFA LDRLSAGSSR G
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