| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3424 |
|---|
| Symbol | |
|---|
| ID | 6281840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3855351 |
|---|
| End bp | 3855902 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642622997 |
|---|
| Product | Redoxin domain protein |
|---|
| Protein accession | YP_001897038 |
|---|
| Protein GI | 187925396 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0519333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0539833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGA GACGGATTCT GGCGGGCGCG TGTGTCGCCA TCGTCGCCGC GGGCGGCGGG
GTACTGGCCA ACCACTGGCT GAATGGCGGC GTGGAGGAAG TCGCGCACGC CGCCCAGCCA
ACCTCTTCTC AAAGCGCAGT CGGGCAACTC TGGACCGCCC CTGTCACGAC GGTGGACGGC
AAGCCACAAA CGCTAAGTGT GCTCAAAGGG CACCCAATCG TCGTCAACTT CTGGGCCTCG
TGGTGCGGGC CTTGCGTCGA GGAAATGCCG GCTCTGTCGC AGCTTCAGCG CGATTACGCG
AAAAAAGGCA TCCAGTTCGT CGGACTTGGC GTCGATTCCG AGAAAAACGT CCAGGCGTTC
CTGCAGAAAG TGAAAGTGGC GTACCCGATC TATATCGCCG GCTTCGGCGG CGCCGACCTC
GCGCGCGCGT TCGGCAATAC TGCGGGCGGG CTGCCGTTTA CCGTCGTAAT CGACGCAAAA
GGCAACATTC GCTCGACAAA ATTAGGACAA ATCGACCCGC AGGCGCTGAA ACAGACGCTC
GACACGCTTT AA
|
|---|
| Protein sequence | MNTRRILAGA CVAIVAAGGG VLANHWLNGG VEEVAHAAQP TSSQSAVGQL WTAPVTTVDG
KPQTLSVLKG HPIVVNFWAS WCGPCVEEMP ALSQLQRDYA KKGIQFVGLG VDSEKNVQAF
LQKVKVAYPI YIAGFGGADL ARAFGNTAGG LPFTVVIDAK GNIRSTKLGQ IDPQALKQTL
DTL
|
|---|
| |