| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3412 |
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| Symbol | |
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| ID | 6281603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3841557 |
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| End bp | 3842333 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622985 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001897026 |
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| Protein GI | 187925384 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0947163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.165905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGC TCGCCGGCAA AGTCGCTCTT GTCACCGGCG CCGGACGCGG CATCGGCTCG
GCGATCGCGC ATGCTTTCGC GCGCGAAGGC GCGGCGGTCG TGCTGGCGGA ACTGGATATC
GAGACCGCGC GGCAGACGGC GGAGCACATC AAGGCGCAGA CCGGCGCGCG CGTACTCGCG
GTGCACACGG ACGTGACGCA GTCCGCGTCG GTTCAGCACG CGGTGAGCGA AGCCGAACGC
GCATTCGGCG CGCTCGACGT ATTGGTGAAC AACGCCGGCA TCAACGTGTT CTGCGACCCG
CTCACGATGA CCGACGACGA CTGGCGCCGC TGCTTCGCAG TGGATCTCGA CGGCGTGTGG
AACGGTTGCC GCGCGGCATT GCCGGGCATG GTCGAACGCG GCGCGGGCAG CATCGTGAAT
ATCGCCTCGA CGCATTCGTT CAAGATCATT CCGGGCTGCT TTCCGTACCC GGTGGCGAAG
CACGGCGTGA TCGGACTGAC GCGCGCGCTC GGCATCGAAT ACGCGCCGCG CAATGTGCGG
GTCAACGCGA TCGCGCCGGG TTACATCGAA ACGCAATTGA CGCACGACTG GTGGAACGAG
CAGGCCGATC CGGCCGCCGC GCAACAGGCG ACGCTCGATC TGCAGCCGAT GAAACGCATC
GGCCGCCCGG AAGAAGTGGC GATGACGGCG GTGTTTCTCG CCTCGGACGA AGCGCCGTTC
ATCAACGCTA CCTGCATCAC CGTGGATGGC GGACGCTCGG CGCTGTATCA CGACTGA
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| Protein sequence | MKRLAGKVAL VTGAGRGIGS AIAHAFAREG AAVVLAELDI ETARQTAEHI KAQTGARVLA
VHTDVTQSAS VQHAVSEAER AFGALDVLVN NAGINVFCDP LTMTDDDWRR CFAVDLDGVW
NGCRAALPGM VERGAGSIVN IASTHSFKII PGCFPYPVAK HGVIGLTRAL GIEYAPRNVR
VNAIAPGYIE TQLTHDWWNE QADPAAAQQA TLDLQPMKRI GRPEEVAMTA VFLASDEAPF
INATCITVDG GRSALYHD
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