Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3346 |
Symbol | ruvB |
ID | 6283660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3765369 |
End bp | 3766433 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642622920 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_001896961 |
Protein GI | 187925319 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.729811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00070323 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCGAAA CCGACAAACT CGCCGCCGAG CGCATCATCG CGGCCACGCC CGTCTCGCCG AACGAAGAAG CGTTCGAGCG CGCGTTGCGT CCGCGCCAGC TCGAAGAATA TGTCGGGCAG GAAAAAGTGC GCGGCCAGCT GGAAATCTTT ATCGAGGCCG CCAAGCGCCG CTCTGAATCG CTCGACCACG TCCTGCTGTT CGGGCCACCG GGTCTCGGCA AGACCACGCT CGCGCACATC ATCGCGCGGG AAATGGGCGT GAATTTGCGG CAAACGTCCG GACCGGTGCT CGAACGCGCC GGCGACCTCG CCGCGCTGCT CACCAATCTC GAAGCCAACG ACGTTTTGTT CATCGACGAA ATCCACCGGC TCTCGCCGGT CGTCGAAGAA ATTCTGTACC CGGCGTTGGA GGATTATCAG ATCGACATCA TGATCGGCGA AGGGCCGGCC GCGCGAAGCG TGAAGCTCGA CCTGCAACCG TTCACGCTGG TCGGCGCGAC CACGCGCGCG GGCATGCTCA CCAACCCGCT GCGCGACCGC TTCGGCATCG TGGCGCGGCT CGAGTTTTAT AACGCCGAGG AACTGGCGCG CATCGTCACG CGTTCGGCGT CGTTGCTGAA TGCGCAGATT CATCCGGACG GCGCGTTTGA AATCGCCAAG CGCGCGCGCG GCACGCCGCG GATCGCGAAC CGTCTGCTGC GGCGCGTGCG CGACTTTGCC GAGGTGAAGG CCGACGGCAA CATCACCGCG CAAGTGGCCG ACGCGGCGCT CAAGATGCTC GACGTGGATG CAGTCGGCTT CGACCTGATG GACCGTAAGC TGCTCGAAGC AATTCTGCAC AAGTTCGACG GCGGCCCGGT CGGCGTCGAC AATCTGGCGG CGGCAATCGG CGAAGAGCGC GACACGATCG AAGACGTCCT CGAGCCATAT CTGATCCAGC AGGGCTTCCT GCAACGCACG CCGCGCGGCC GCGTCGCCAC GCTGCTCACG TACCGGCATT TCGGCCTCGC CGCGCCGGAT TCGTCGAGCG GCTTGCCGGG TCTGTGGGAT TCCGCCGCGA CCTGA
|
Protein sequence | MIETDKLAAE RIIAATPVSP NEEAFERALR PRQLEEYVGQ EKVRGQLEIF IEAAKRRSES LDHVLLFGPP GLGKTTLAHI IAREMGVNLR QTSGPVLERA GDLAALLTNL EANDVLFIDE IHRLSPVVEE ILYPALEDYQ IDIMIGEGPA ARSVKLDLQP FTLVGATTRA GMLTNPLRDR FGIVARLEFY NAEELARIVT RSASLLNAQI HPDGAFEIAK RARGTPRIAN RLLRRVRDFA EVKADGNITA QVADAALKML DVDAVGFDLM DRKLLEAILH KFDGGPVGVD NLAAAIGEER DTIEDVLEPY LIQQGFLQRT PRGRVATLLT YRHFGLAAPD SSSGLPGLWD SAAT
|
| |