| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3339 |
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| Symbol | |
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| ID | 6281484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3759627 |
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| End bp | 3760691 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622913 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_001896954 |
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| Protein GI | 187925312 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.024636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTC TCGGCTCCCA CAATCTGCGT AATAACCTGT TCGTCGCGCC TATGGCCGGC
GTGACCGACC GGCCGTTCCG GCAACTGTGC AAACGGCTGG GCGCGGGCTA TGCGGTGTCG
GAAATGGTCG CCTCGAACGC GCAGTTGTGG AAAAGCGAGA AGACCATGCG CCGTGCCAAC
CACGCGGGCG AGGTCGAGCC GATCGCCGTG CAGATCGCCG GCGCCGATCC GGCCATGATG
GCCGAAGCGG CTCGCTACAA CGTGGCGAAC GGCGCGCAGA TCATCGACAT CAACATGGGC
TGCCCGGCCA AGAAGGTATG CAACGTGGCG GCGGGTTCGG CTTTGCTGCA GAACGAGCCG
CTGGTGCAAC GCATTGTCGA GGCCGTGGTG GGCGCCGTGG GCGTCGGGCC CGACGCGGTG
CCCGTCACGC TGAAGATCCG CACCGGCTGG AATCGCGAGA ACAAGAATGC GCTGAATGTC
GCGCGTCTGG CCGAATCGGC GGGCATTTCC ATGCTGACCG TGCATGGCCG CACGCGTGCC
GACCTGTATC ACGGGGACGC CGAATACGAA ACCATCGCCG CGGTGAAAGC CGCCGTGCGC
ATTCCCGTGG TCGCCAACGG CGACATTACC TCGCCGCACA AGGCGCGCGA GGTACTCGCC
GCCACCGGCG CGGACGCCAT CATGATCGGC CGCGCGGCGC AGGGGCGCCC ATGGCTGTTT
CGCGAGATCG AGTATTTCCT GCAAACGGGC GAGTTGCTGC CGCCGCCGCG GATCGACGAG
ATCCAGCAGG TGATGAACGA GCATCTGGAA GACCACTACG CGTTCTACGG GGAATTTACC
GGTGTCCGCA CTGCGCGTAA GCACATCGGC TGGTACACTC GCGGCCTTTC TGGCGCCAAC
GTGTTCCGGC ATCGCATGAA TACGCTAGAC ACCACGCGCG AACAACTCCT CGCCGTCAAC
GAATTCTTCG ACGCCCAAAA GGCGATCTCA GACCGTCTCG TCTACGTCGA CGAGACGCTC
AGCGAAAACG GCGAGCCGGA CCAAACCGAC CGACTAGCAG CATGA
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| Protein sequence | MPTLGSHNLR NNLFVAPMAG VTDRPFRQLC KRLGAGYAVS EMVASNAQLW KSEKTMRRAN
HAGEVEPIAV QIAGADPAMM AEAARYNVAN GAQIIDINMG CPAKKVCNVA AGSALLQNEP
LVQRIVEAVV GAVGVGPDAV PVTLKIRTGW NRENKNALNV ARLAESAGIS MLTVHGRTRA
DLYHGDAEYE TIAAVKAAVR IPVVANGDIT SPHKAREVLA ATGADAIMIG RAAQGRPWLF
REIEYFLQTG ELLPPPRIDE IQQVMNEHLE DHYAFYGEFT GVRTARKHIG WYTRGLSGAN
VFRHRMNTLD TTREQLLAVN EFFDAQKAIS DRLVYVDETL SENGEPDQTD RLAA
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