| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3329 |
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| Symbol | |
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| ID | 6284245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3747892 |
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| End bp | 3749265 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642622903 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001896944 |
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| Protein GI | 187925302 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.099089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA AAGTTTATGT AAAGACCTTT GGCTGCCAGA TGAACGAGTA CGACTCCGAC
AAAATGGTCG ACGTACTCGG CGCGGCTGAA GGGCTCGTCA AGACCGACAC GCCGGAAGAC
GCGGACGTCA TTCTGTTCAA CACGTGCTCG GTGCGCGAAA AAGCGCAGGA AAAAGTGTTC
TCCGACCTCG GCCGCGTGCG CGAGTTGAAG GAAGCGAATC CGAATCTGAT CATCGGTGTG
GGTGGTTGCG TTGCGAGCCA GGAAGGCGCG GCGATCGTGT CGCGCGCGCC GTACGTCGAT
CTGGTGTTCG GCCCGCAAAC GCTGCACCGT CTGCCGCAAA TGATCGACAA GCGCCGTGAA
AGCGGCCGCG CGCAAGTGGA CATCTCGTTC CCGGAAATCG AAAAGTTCGA TCACCTGCCG
CCGGCGCGCG TCGACGGCCC GAGCGCGTTC GTGTCGATCA TGGAAGGCTG CAGCAAGTAC
TGCAGCTATT GCGTCGTGCC GTACACGCGC GGCGAAGAAG TGTCGCGTCC GCTGGATGAC
GTGCTGACCG AAATCGCCGG TCTCGCCGAT CAAGGCGTGC GCGAAGTCAC GCTGCTCGGC
CAGAACGTGA ACGCCTATCG CGCCGGCCTC ACGCTGGGTT CGACGGAAAT CGCCGACTTC
GCTCAGTTGA TCGAATACGT CGCGGATATT CCGGGCATCG AACGGATTCG CTACACCACG
TCGCATCCGA AGGAATTCAC GCAGCGCCTG ATCGACACCT ACGCGAAGGT GCCGAAGCTC
GTCAGCCACC TGCATTTGCC GGTGCAGCAC GGCTCGGATC GCATTTTGAT GGCCATGAAG
CGTGGCTACA CGGTGCTCGA ATACAAGTCC GTGATCCGCA AGCTGCGCGC AATCCGCCCT
GACCTGTCGC TTTCCACGGA CATGATCGTC GGCTTCCCCG GCGAGACGGA AGAAGACTTC
GACAAGATGA TGGCGCTCGT GCACGAGATG AAGTACGACA CCAGCTTCTC GTTCATCTAC
AGCCCGCGTC CCGGCACGCC GGCCGCGAAT CTGCACGACG ACACGCCGCG CGAAGTGAAG
CTCAAGCGTC TGCAACATTT GCAGGCCACC ATCGAGGAAA ACGTGCAGCG CATCAGCGAT
TCGATGGTCG GCAAGATCGA GCGCATACTG GTTGAGCGCC CGGCCCGCAA GGATCCGAAC
GAACTCGCCG GCCGCACCGA GAACAACCGG GTGGTGAATT TCCCGGCGCC AATCGCGTCG
CACGCAAGGC TGATCGGCCA GATGGTCGAC GTGAAAATCG TCAAAGCGTA CCCACATTCG
CTACGTGGCG AGCTCGTGCT GGTTCATGAC GACGCCCCGG CCACGACCCA TTAA
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| Protein sequence | MTKKVYVKTF GCQMNEYDSD KMVDVLGAAE GLVKTDTPED ADVILFNTCS VREKAQEKVF
SDLGRVRELK EANPNLIIGV GGCVASQEGA AIVSRAPYVD LVFGPQTLHR LPQMIDKRRE
SGRAQVDISF PEIEKFDHLP PARVDGPSAF VSIMEGCSKY CSYCVVPYTR GEEVSRPLDD
VLTEIAGLAD QGVREVTLLG QNVNAYRAGL TLGSTEIADF AQLIEYVADI PGIERIRYTT
SHPKEFTQRL IDTYAKVPKL VSHLHLPVQH GSDRILMAMK RGYTVLEYKS VIRKLRAIRP
DLSLSTDMIV GFPGETEEDF DKMMALVHEM KYDTSFSFIY SPRPGTPAAN LHDDTPREVK
LKRLQHLQAT IEENVQRISD SMVGKIERIL VERPARKDPN ELAGRTENNR VVNFPAPIAS
HARLIGQMVD VKIVKAYPHS LRGELVLVHD DAPATTH
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