Gene Bphyt_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3325 
Symbol 
ID6284241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand- 
Start bp3744174 
End bp3744863 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID642622899 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001896940 
Protein GI187925298 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.610712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.167348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCCC CGCTTGCGCT CGTTCGCGAT CCCACGGCTG ACACCGATAC GTCGCCGCGT 
GCCGCTGAAC CTTTCGACGC ACTTGAACAT CTGGTCGGTG TGAATCTCGC CCGTTTGCGC 
GCCGAGCGGC AACTGTCGCT CGATGCTTTG GCCCGCGCGT CCGGCGTTTC TCGCGCCATG 
CTCGCGCAGA TCGAATCGGC GCGCAGCGTG CCGTCCATCA AGGTGCTGTG CAAGGTGGCG 
GCGGCGTTGA AGGTGTCGGT GGCGGCTTTC TTGCGGCGTC ACGCGACGAA CGGCTTCGAG 
CATTTGCCGG CGGAGCGCTC GTCGCGTGTC GTCAGTTCGA ACGGCCGCTA TTCGGCCCGG 
CCGCTTTATC CCGACGCCGA ACCGACCGCC GCCGAGTTTC ACGAACTGCG TATTGCGCCG 
TTGCACACCG AAGCCGGCAC GCGCCGCGCG CCGGGCACGA CGGTGAATCT GGTGGTGAGC 
GAAGGCACGC TGGAAGTCAG CGTCCACGAT CAACGCCAGT TGCTGGCCAC CGGCGACGCG 
ATCGTGTTCG ACGCCGACCA GCCGCATAGC CTGCGCAATC CCGGCGACAC GGAAGCGCGC 
GCGTTTCGCG TGACGTTGAA GGCGGAGACG CCGCCGCGCT GGGACGTGCC CGCGCACCAT 
GAGCCGGCGC GCGAAGTCGC ACCGGTTTGA
 
Protein sequence
MHSPLALVRD PTADTDTSPR AAEPFDALEH LVGVNLARLR AERQLSLDAL ARASGVSRAM 
LAQIESARSV PSIKVLCKVA AALKVSVAAF LRRHATNGFE HLPAERSSRV VSSNGRYSAR 
PLYPDAEPTA AEFHELRIAP LHTEAGTRRA PGTTVNLVVS EGTLEVSVHD QRQLLATGDA 
IVFDADQPHS LRNPGDTEAR AFRVTLKAET PPRWDVPAHH EPAREVAPV