Gene Bphyt_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3266 
Symbol 
ID6283583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3680461 
End bp3681762 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content68% 
IMG OID642622839 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001896881 
Protein GI187925239 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.482122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGA TTCGCCGTCA ATTGCTGGTC TGGCTGCTGG CGCTGGTGCT GCTCGGCGTG 
GGCATCGCGG GTTGGCTGAT CTACCGGCAA GCGCTTGCCG AAGCCAACGA ACTTTTCGAT
TACCAGTTGG AGCAGATCGC CGCGGCGCTG CCGTCGGAAC CGTTCTCGCA AGTGCTCGGC
TCGCGCGACA CCGGCGACGA AGGCATCGTG CTGCAAATCT GGAATCGCAA CGGCGTGCTG
ATGTACTACT CGCGTCCGCG TGCGCCGCTC GCGCCGCGTG CCGAACTCGG CTTTTCGACC
GAGCACACGG ATCGCGGCGA GTGGCGCGTG TATGGCGCGA TCGTCGGCGA TAACGTGGTG
CAGCTGGCGC AGCCGGTTTC CGTGCGCAAC CGGCTCGCCG CGAATGTCGC GTTGCGTACG
CTGTGGCCGT TGATCGTGCT GCTGCCGTTG CTCGGGCTCG CGGTGTGGGT GGTGATCGGT
CGCGGATTGA GGCCGTTGCG GCGCGTGACG ACGGCGCTCG ACGCGCGTCA TCCCGAGGCG
CTCGATCCTT TACCGGACCA ACGCCTGCCG CTCGAAGTGC AGCCGCTCGT GCGCGCGCTG
AACGGACTGC TCGAACGGCT CGCCACCGCG CTCGACATTC AGAAAGCCTT TGTCGCCGAC
GCCGCGCATG AATTGCGCAC GCCGCTCGCC GCCGTGCAGA TTCAGGCGCA ACTGGTGGCG
CGCGCGAAAG ACGACAGCGG CCGCAGCGAA GCACTCGCCG ATCTGCAAGC CGGCGTGACG
CGCGCGACAC GTCTTGCCGA ACAACTGCTG GCGCTCGCGC GTTCCGAACC GGACGGCCTC
GCCGCCACCG ACGCGATCGA TCTGCGCGCG CTGCTGCAGG AGTGCGTGGT GGCTTACGCG
CCGCTTGCGC TCGATCGCGG CGTCGATCTC GGCATCGAGG CAACGGAATC GGCCACCGTG
ATCGGCGACG CCGACGCGCT GCGCGTAATG TTCAACAACC TCGTGGATAA CGCAACCAAA
TACACGCCGC GCGGCGGACG TGTGGACGTC GGCCTGCATG TCGAAGAAGG GCACCCGGTC
GTGCGGATCG CCGACAGCGG GCCGGGGATC GAACCGGCCG AACGCGATCG CGTGTTCGAT
CGGTTCTATC GCGCGGGCGC AGGCGCGAAT CGCGCTCGCA CCGACGTGGC CGGCAGCGGC
CTGGGTCTGG CGATCGTGCG CCGCATCGCC GTGCAGCATC ATGCGGCCGT ATCGCTCGAC
GAATCCCCCG CGGGTGGCTT GCAGGTCAGC GTGCGCTTTT GA
 
Protein sequence
MRSIRRQLLV WLLALVLLGV GIAGWLIYRQ ALAEANELFD YQLEQIAAAL PSEPFSQVLG 
SRDTGDEGIV LQIWNRNGVL MYYSRPRAPL APRAELGFST EHTDRGEWRV YGAIVGDNVV
QLAQPVSVRN RLAANVALRT LWPLIVLLPL LGLAVWVVIG RGLRPLRRVT TALDARHPEA
LDPLPDQRLP LEVQPLVRAL NGLLERLATA LDIQKAFVAD AAHELRTPLA AVQIQAQLVA
RAKDDSGRSE ALADLQAGVT RATRLAEQLL ALARSEPDGL AATDAIDLRA LLQECVVAYA
PLALDRGVDL GIEATESATV IGDADALRVM FNNLVDNATK YTPRGGRVDV GLHVEEGHPV
VRIADSGPGI EPAERDRVFD RFYRAGAGAN RARTDVAGSG LGLAIVRRIA VQHHAAVSLD
ESPAGGLQVS VRF