Gene Bphyt_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3219 
Symbol 
ID6281546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3627780 
End bp3628628 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content64% 
IMG OID642622793 
Productthioredoxin 
Protein accessionYP_001896835 
Protein GI187925193 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA CTCTGGCCAC TTTCGAACAG GACGTCATCA CGGCGTCGAC ACTGGCCCCC 
GTGCTGGTCG ATTTCTGGGC GCCCTGGTGT GGCCCGTGCA AGACCCTCGG CCCGATGCTG
GAAAAGCTCG AAGCCGAAGC CGCCGGCAAA TGGAAGCTCG TGAAGGTGAA CGTAGACGAG
AACCAGGAAC TGGCCGCGCA CTTCCAGGTG CGCAGCATTC CGCACGTCAT GGCTTTTGCC
GACGGCCGGC CGGTCGATCA GTTCGTCGGC GTGCTGCCGG AAGGACAGTT GCGCGAGTTT
ATCGAGCGGC TCGTGCCGCA AGGCGCGGAC GCCGCGCGTC TCGAAGCGCA AGCCGCGCTG
GCCGAAGGCC GCCGCGAAGA TGCGTACGAC GCGCTGCAAG CCGCCCTCGC CTACGACCCG
GGTTTCGACG AAGCGCGCAT GGATCGCATT GAAATGCTGC TCGAAGACAA TCGTCTCGAC
GAAGCGCGCA ACGAAGTCGA TCTGCTGTCG CCGAAAACGA CTCAAGGTAT CGACGCGCGT
TTCAACGCGA TCAAGACACG CCTCGACGCC GTGGACGCCG CCGCGGATCT GCCGCCCACC
GATGCGCTGG AAGCGAAGGT CGCGGCCGAC CCGGACGATC TCGAAGCGCG TTTCGATCTG
GCCAGCGCGT TTATCGCGCG CCGCAAATAC GCGGAAGCGC TCGAACATTT GCTGGCGATC
GTGCAACGCG ACCGTACGTT CCGCGACGAT ATCGGCCGTA AGACGATGCT GTCGGTATTC
GATCTGGCCG CGCATCAGCC GGAACTGGTG TCGCAATGGC GGCGCAAGCT GAGCGCTTCG
TTGTTCTGA
 
Protein sequence
MDTTLATFEQ DVITASTLAP VLVDFWAPWC GPCKTLGPML EKLEAEAAGK WKLVKVNVDE 
NQELAAHFQV RSIPHVMAFA DGRPVDQFVG VLPEGQLREF IERLVPQGAD AARLEAQAAL
AEGRREDAYD ALQAALAYDP GFDEARMDRI EMLLEDNRLD EARNEVDLLS PKTTQGIDAR
FNAIKTRLDA VDAAADLPPT DALEAKVAAD PDDLEARFDL ASAFIARRKY AEALEHLLAI
VQRDRTFRDD IGRKTMLSVF DLAAHQPELV SQWRRKLSAS LF