| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3187 |
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| Symbol | |
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| ID | 6281271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3592062 |
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| End bp | 3593519 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622761 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001896803 |
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| Protein GI | 187925161 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.500903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0852056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGC CGACTCCGCC CGCCGCCGCT TCCACTACGT CCAGTCCACC TTCGCCCCGC
TCGCTCACCG TGATGCCGTG GGTCGTCGCC ACTGGCTTCT TCATGCAGAC GCTCGACTCG
ACCATCGTCA ACACCGCGCT CCCCGCGATG GCGACGAGCC TCGGCGAGTT GCCGTTGCGC
ATGCAATCAG TAGTGATCGC CTATTCGCTG ACGATGGCCG TCATGATCCC GGTGTCCGGC
TGGCTCGCCG ACAAGCTCGG CACACGCCGC GTGTTCTTCA GCGCGATCCT CGTGTTCGCG
ATCGCCTCGT TGCTGTGCGC GAACGCGCAT ACGCTGAATC AGCTGGTGGC CTTCCGCATC
ATGCAGGGCG TGGGCGGGGC AATGCTGCTG CCGGTGGGAC GGCTCGCCGT GCTGCGTACC
TTTCCGGCCG AACGCTATTT GCCCGCGCTC TCGTTTGTGG CGATCCCGGG TCTCATCGGC
CCGCTGATCG GCCCCACGCT CGGCGGCTGG CTCGTGAAGA TCGCCTCGTG GCACTGGATC
TTTCTGATCA ACGTGCCGGT CGGGATCGTG GGTTGCATTG CCACGCTCAT CTTCATGCCG
GATAGCCGGA ACGAACATGT CGGCAAATTC GACATGAAAG GCTACCTGTT GCTGATTGTC
GGCATGGTGG CGATTTCGTT CGCGCTCGAC GGGCGTACCG AGTTCGGCAT CCAGCACGCC
ACGGTTCTGG TGCTGCTGAT CCTGAGCCTC GCCTGCTTTG TCGCCTATGG TTTGCACGCC
GTGCGCGAGC CCTCGCCGAT TTTCTCGCTC GACCTCTTCA AGATCCATAC CTTCAGCGTC
GGCCTGCTCG GCAATCTGTT CGCGCGGATC GGCAGCGGCG CGATGCCCTA TCTGATTCCG
CTGCTGTTGC AGGTGAGTCT CGGCTATAGC GCCTTCGAAG CCGGCATGAT GATGCTGCCG
GTGGCGGCTG CGGGCATGGC GTCCAAACGC CTTGTGACGC ACCTGATCAT CAAGCACAGC
TATCGACGCG TACTGATCGT CAACACGGTG CTGGTCGGCC TGACCATGGC GAGCTTCGCG
CTTACCACCG CCAACCAGCC GCTGTGGCTG CGCCTCGTGC AACTGGCGTT CTTTGGCGGC
GTCAACTCGA TCCAGTTCAC CGCGATGAAC ACGTTGACGC TCAAGGACCT GGGCACGGGC
GGCGCGAGCA GCGGCAACAG CCTGTTTTCG CTGGTCCAGA TGCTGTCGAT GAGTCTCGGC
GTGACCGTTG CCGGCGCTCT GCTCGCGACC TTCACCGGCC TGCTGCCGCG CGTGACGGCC
GCCAACTCGC TGCCCGCGTT CCACGCGACG TTTCTGTGTG TCGGCATTAT CACGGCAGGC
TCCTCGTGGA TCTTCGCGCA ACTGTCGCCG GACATCCGCA CGCCCGCGAA GAAGACCGAT
CCGTCCGAAC GAACCTGA
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| Protein sequence | MSTPTPPAAA STTSSPPSPR SLTVMPWVVA TGFFMQTLDS TIVNTALPAM ATSLGELPLR
MQSVVIAYSL TMAVMIPVSG WLADKLGTRR VFFSAILVFA IASLLCANAH TLNQLVAFRI
MQGVGGAMLL PVGRLAVLRT FPAERYLPAL SFVAIPGLIG PLIGPTLGGW LVKIASWHWI
FLINVPVGIV GCIATLIFMP DSRNEHVGKF DMKGYLLLIV GMVAISFALD GRTEFGIQHA
TVLVLLILSL ACFVAYGLHA VREPSPIFSL DLFKIHTFSV GLLGNLFARI GSGAMPYLIP
LLLQVSLGYS AFEAGMMMLP VAAAGMASKR LVTHLIIKHS YRRVLIVNTV LVGLTMASFA
LTTANQPLWL RLVQLAFFGG VNSIQFTAMN TLTLKDLGTG GASSGNSLFS LVQMLSMSLG
VTVAGALLAT FTGLLPRVTA ANSLPAFHAT FLCVGIITAG SSWIFAQLSP DIRTPAKKTD
PSERT
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