Gene Bphyt_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3180 
Symbol 
ID6282453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3584906 
End bp3585385 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content63% 
IMG OID642622754 
Producthypothetical protein 
Protein accessionYP_001896796 
Protein GI187925154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.882621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000653406 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAACGAA ACGTCCTACC CTCCACGGCA CGCGTGGCCA CCGGTCTGTT GATCGCCGCC 
GCGCTCGGCC TTGCATCGCT CGCTAATGCG CAAACACCGG CTCAAACGCC CCAACCAGCA
CAGCCGCTCT CACCGACGCT GTCGCAAGCC GCCCCGCCGG TCGATCCCAC CTTCTCCGCC
TATTCGCTCG CGCAAACCTG CAAGCAGAAA ACCGACAATG TCGCGCAAGG TCAATGCGTC
GGCGCGATTC GCGGGATCAT CCACGGCTAT CAGTACGGCG TGCTGTTCCT CGGGCAGCGC
AGCGCGTTGC CCGCCAATGA AACGCAGCGC GTGTCGCTGT GCCTGCGCAA TGTGCAGGTG
TCGTCGATCG TCGACGAATT CGTTGCGGAC GCCGCGCAGG TCAACGAAGA TTCGCTCAAG
CACACGCCTG CAGAAGTCGC GGTGCTCGGC TCCGTTCACA TGCACCACAG CTGCAACTGA
 
Protein sequence
MQRNVLPSTA RVATGLLIAA ALGLASLANA QTPAQTPQPA QPLSPTLSQA APPVDPTFSA 
YSLAQTCKQK TDNVAQGQCV GAIRGIIHGY QYGVLFLGQR SALPANETQR VSLCLRNVQV
SSIVDEFVAD AAQVNEDSLK HTPAEVAVLG SVHMHHSCN