| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3165 |
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| Symbol | |
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| ID | 6280864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3564877 |
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| End bp | 3567174 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642622739 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001896781 |
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| Protein GI | 187925139 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0429332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00252182 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGCCC AGGAACTGGA AGTCAGCCTG CACATGGCGT TCATGGAAGC ACGCCAGGCG
CGGCACGAGT TCATAACGGT CGAACATCTT TTGCTGGCAC TGTTGGACAA CCCAACGGCC
GCGGAGGTGT TGCGTGCATG CGCGGCCAAT ATCGAGGATC TGCGCCAGAA CCTGCGCAAC
TTCATTCATG ACAACACGCC GACCGTGCCT GGCACGGACG ACGTCGACAC GCAGCCCACG
CTGGGTTTCC AGCGTGTGAT CCAGCGCGCG ATCATGCATG TTCAGTCCAC CTCGAATGGC
AAGAAGGAAG TGACCGGCGC GAACGTGCTG GTGGCGATCT TCGGCGAGAA GGATTCGCAT
GCGGTGTACT ACCTGCAACA GCAGGGCGTG ACGCGTCTGG ACGTGGTGAA TTTCATCTCG
CACGGCATCG CCAAGACGAG CAGCACGGAC GCCGCGAAAG CGAGCGACGC GAATGCCGAG
TCCGACGAAG CCGCCGCGCA GAAGGAAACC CCGCTCGCGC AGTTCACCCA GAATCTGAAC
CAGATGGCGA AAGACGGCCG CATCGATCCG CTGATCGGAC GCGAGTCGGA AGTCGAGCGT
GTGGTCCAGG TACTGTGCCG CCGCCGTAAG AACAATCCGC TGCTAGTCGG CGAGGCGGGC
GTCGGCAAGA CGGCGATCGC CGAAGGTCTC GCTTGGCGCA TTACGCGCGG CGAAGTGCCG
GACATTCTCG CGGATGCCCA GGTGTATTCG CTCGACATGG GCGCGCTGCT CGCCGGCACT
AAATATCGCG GCGACTTCGA ACAGCGTCTG AAGACGGTCC TCAAGGAATT GAAGGAACGT
CCGCACGCGA TTCTGTTCAT CGACGAAATT CATACGCTGA TCGGCGCAGG CGCTGCGTCG
GGCGGCACGC TGGACGCGTC GAACCTGCTC AAGCCAGCGT TGTCGTCGGG CACGCTGAAG
TGCATCGGCG CGACCACGTT CACGGAATAT CGCGGCATCT TCGAAAAAGA CGCGGCGTTG
TCGCGCCGTT TCCAGAAGGT CGACGTGACC GAGCCGACCG TCGAACAGAC GGTGGCGATC
CTGCGTGGCC TGAAGTCGCG TTTCGAAGAG CATCACGGCG TGAAGTATTC GTCGGGCGCG
CTGTCGGCGG CGGCTGAGTT GTCGGCACGC TTCATCACGG ATCGTCATTT GCCGGACAAG
GCGATCGACG TGATCGACGA AGCGGGCGCG GCGCAACGCA TCCTGCCGAA GTCGAAGCAG
AAGAAGACCA TCGGCAAGAA CGAGATCGAG GAAATCATCT CGAAGATCGC TCGCGTCCCG
CCGCAAAGTG TGTCGCAAGA CGATCGCAGC AAGCTGCAAA CGCTGGATCG CGATCTGAAG
AGCGTGGTGT TCGGGCAAGA CCCAGCAATC GACGCGCTGT CCGCCGCGAT CAAGATGGCG
CGTGCGGGTC TCGGCAAGCT GGACAAGCCG ATCGGCGCGT TCCTGTTCTC CGGTCCGACC
GGTGTCGGCA AGACCGAAGT GGCGAAGCAA CTGGCGTTCA CGCTGGGTAT CGAGCTGATC
CGCTTCGACA TGTCGGAATA CATGGAACGT CATGCGGTCA GCCGTTTGAT CGGTGCGCCG
CCGGGCTATG TCGGTTTCGA CCAGGGCGGT CTGCTGACCG AAGCTGTCAC GAAGAAGCCG
CATTGCGTGC TGCTGCTCGA CGAAATCGAG AAAGCGCATC CGGACATCTA CAACGTGCTG
CTGCAGGTCA TGGACCATGG CACGCTGACG GACAACAACG GCCGCAAGGC GGATTTCCGC
AACGTCATCA TCATCATGAC GACGAATGCG GGCGCCGAGG CAATGGGCAA GTCGGTGATC
GGCTTCACGA ATCGTCGGGA AACCGGCGAC GAAATGGTCG ACATCAAGCG CATGTTCACG
CCTGAGTTCC GTAACCGTCT GGACGCAACG ATCAGCTTCC GTTCGCTCGA TGAAGAAATC
ATCATGCGCG TGGTCGACAA GTTCCTCATG CAGCTGGAAG ATCAGTTGCA CGAGAAGAAG
GTCGATGCGC TCTTCACCGA CGCGCTGCGC AAGCATCTCG CCAAGCACGG TTTCGATCCG
TTGATGGGCG CCCGGCCGAT GCAGCGTTTG ATCCAGGACA CGATCCGTCG TGCACTGGCC
GACGAACTGC TGTTCGGCAA GCTGATGAAC GGCGGCCGCG TGTCGGTCGA CGTGGATGCC
GAAGACAAGG TGCAATTGAC CTTCGACGAA CATCCGGCGC CGCGCAATCC GAATCCGGAA
GCGGTGGAAA TCGAGTAA
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| Protein sequence | MIAQELEVSL HMAFMEARQA RHEFITVEHL LLALLDNPTA AEVLRACAAN IEDLRQNLRN
FIHDNTPTVP GTDDVDTQPT LGFQRVIQRA IMHVQSTSNG KKEVTGANVL VAIFGEKDSH
AVYYLQQQGV TRLDVVNFIS HGIAKTSSTD AAKASDANAE SDEAAAQKET PLAQFTQNLN
QMAKDGRIDP LIGRESEVER VVQVLCRRRK NNPLLVGEAG VGKTAIAEGL AWRITRGEVP
DILADAQVYS LDMGALLAGT KYRGDFEQRL KTVLKELKER PHAILFIDEI HTLIGAGAAS
GGTLDASNLL KPALSSGTLK CIGATTFTEY RGIFEKDAAL SRRFQKVDVT EPTVEQTVAI
LRGLKSRFEE HHGVKYSSGA LSAAAELSAR FITDRHLPDK AIDVIDEAGA AQRILPKSKQ
KKTIGKNEIE EIISKIARVP PQSVSQDDRS KLQTLDRDLK SVVFGQDPAI DALSAAIKMA
RAGLGKLDKP IGAFLFSGPT GVGKTEVAKQ LAFTLGIELI RFDMSEYMER HAVSRLIGAP
PGYVGFDQGG LLTEAVTKKP HCVLLLDEIE KAHPDIYNVL LQVMDHGTLT DNNGRKADFR
NVIIIMTTNA GAEAMGKSVI GFTNRRETGD EMVDIKRMFT PEFRNRLDAT ISFRSLDEEI
IMRVVDKFLM QLEDQLHEKK VDALFTDALR KHLAKHGFDP LMGARPMQRL IQDTIRRALA
DELLFGKLMN GGRVSVDVDA EDKVQLTFDE HPAPRNPNPE AVEIE
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