Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3164 |
Symbol | |
ID | 6280863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3562300 |
End bp | 3564810 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642622738 |
Product | hypothetical protein |
Protein accession | YP_001896780 |
Protein GI | 187925138 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0045135 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGATCA AATATGATGC GATCGTTGGT TCAGGCGCTA ACGAATGGTA TGGCACGATC ATCGTTTCCA ACCTGCGCTA TGAAGACGGT AGCGCGGTCG CCGTCAACCA GTTCCTCGAG TTCAACTTTC GCTCGCCGGC CAATCTGGAC GCCACGGCTA TCCAGCCGTC GTTCAGCACA TGGGTCATCG ACGCCATCAC CGCGGACGCA ACGCAGATCG GCGACGGCAC CTTCGATGTC ACTGCCATGA TCCGCTACAC GACCAGCTAT ACGATGCAGC CGGCCGACCA GATTACGATC GGCGTGAACG GCGATCTCTT GACCGACCCG CAAACCTGGC TCGATTCATT TGTGTTCGCC GCCGACCAGG CGCCGGCCAT CAGCGGGACG GTGTCCGTAA CTTGTGCGCC CGCGCCGGAT CCGGCGCTAG CCGGCATTGC GCCCGTGCTC ACCCTCACGC GAGGGGACGC GGGCGTCATG ATGCCGCTTG GCTATGGGGC CACTGACAGC ATCGCCGTCG ACCAGGGGAC CTACGCGGTG ACGGGCGACA GTGTCAACAC AAGCGATCAG ACGGTCATAG CGCCGCTCGT GATCGACCGC AACACGATCG ACGTCGTGGC CGGCGCGACG GCCACGCTCG GGGTGACATT CGCTCCCGTC GAATACTATT GCGCACTTGA TATTTCGATC GGGTCGCTGT CAGGGTTGTC GACCGAAACG CTCAACGTCA CATTGACCGA CAGCACGACA GGCGAAACGC TGGCCGTATT CGCCACGACG ACCAACCACG TCACTTCCTT GCGCAAGCTG CCGCCATCGG GCATGGCACG TGTGTCGATT CAGAACGTCG CACTCGACAA TGTCGACTAT TCGTTCAACG TTCCGCTTGT CACGCTGACG AACGCATTGC AGACCGTAGC CATCGACAAT TCCATGGTGA AGACGGAAAA CGTCGACACC ACGGGCTATA CCAGGGTCGC GATCAATGTC ACCGCCGACG ATCCACTCGA CCGGCAGCTC CCGTTGCGTC TGATTGGCGG CAGCATGAAC TATCTGCAGA ACGTCACGGC AACGTCGCAA CAGACCGCTT TCTCGGCCCT GGTTCAACCG GGCGACTACA CCGTAGTGGC CAACGATTTC CTCGACACCA GCGTCGTCTA CGCCGTCGAA ACGCCATCGC TTTTGAGCGT GCCAGCCAGC GGCGGCGCTG AACTCGACGT GACGATCGAG GCATCGGCCA ATCTCAGTGT GCGCGGCTTT CCCGCCTACC TGTGCTTCGG CGGCTGTGCC AACCTGACGC CGTCCAATCA GGTGGACTTC GCTGCGGCAC GCGCGACCTC GGTCTTCGAC TATGCCGGCA CCGACGGCGC CGGCGATTCA ACCGTCTATC TGACCGACGA CCCGCAAACC CGAGCGACCA TCACGCTCGC GCGCACCGTC GAAACCCAAC TGGGCAACAT TCAACCCGTC TTGCCGGTCA TGGTGTCGTA CACATGCAAT CTTTCGCTCG GCGACACGCC CACCATCCTC GCCAACGCCG ACGCTCACGC GCACAGTTTT TCCAACTACA TCCTGGCGCT CAACATCGCG ATGGAGGCCG TCGACACCGA GCACCCCGTC CCCGCGGGCT TTATCGTGAA CCCAGACTTT CTGGGCGCTT GCCAGCAAGC CAACTACGGA GCGACCTACC CGATGCCCGT GCGCGGACCG CTACAGCAAG CACTCGACCG CTGGTCGATC ACGGCCGCCA TTCCTGCCGA CGTCAGCGAG ACCATTGCGG GCTATGTGCT CGCGGTGAAC TGGCTGACGC GCACGGTGGC GCCCAGCGTG ACCTTCGGCT GGCAGATCAA TCTTTGGGGT GTCGGCTTCT CGGAATGGAT CTACGCGGAC GACATCGATC CCGCCGAGAT GGCTCAACAG ACTGCGGACT ATGTGACGAG CCTCGGCGTC TACAACGCAC CCTACGCGCC CGACTTCCTG GCGATCGATC GCTACGAAGC CGACGACTTC ACGCAACGCG CCTACGTGAA CGGCTACTGC TACGGCCCAC GCGAATGGGA CCGCTACTTC GATTTCTGCA AGGCAGTCAG CCGCGCGCTC AAATTGCCGG TGATGCCATG GCAGATGCCC GCGAGCCGCA TTCCGAACAC GACCGACCCG GTCGCGACGA ATTTCGACTC TCAACATTGG GGCACGGGCG GGAGTTGTCT GCTCGGCGAT CCTGCAATCG GCTCCGACTA CCACAACGTG CATCCCGCCA TTCTCGCGCT GCAGTTCCCG GAAGCGTTCC AGCAGAGCAT GGGTGCTACG GCCGAGGACA TGTTCATCCG CTCCGAACCA TTCGACGTGT CGAGCCCTCT GTACGCCGAC TTCCCGTTGC GAGGCATCTT CACCGTGCTG CTCGGCGGTG GCGCAACGAC GGGCATCGTT TCCGCAATCG GTAATCCTGA GCCCTGGGCA AGACAGAAAC TGAACGCCTA CATGAACAAG CCGATCACGT TCGATCAATA A
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Protein sequence | MKIKYDAIVG SGANEWYGTI IVSNLRYEDG SAVAVNQFLE FNFRSPANLD ATAIQPSFST WVIDAITADA TQIGDGTFDV TAMIRYTTSY TMQPADQITI GVNGDLLTDP QTWLDSFVFA ADQAPAISGT VSVTCAPAPD PALAGIAPVL TLTRGDAGVM MPLGYGATDS IAVDQGTYAV TGDSVNTSDQ TVIAPLVIDR NTIDVVAGAT ATLGVTFAPV EYYCALDISI GSLSGLSTET LNVTLTDSTT GETLAVFATT TNHVTSLRKL PPSGMARVSI QNVALDNVDY SFNVPLVTLT NALQTVAIDN SMVKTENVDT TGYTRVAINV TADDPLDRQL PLRLIGGSMN YLQNVTATSQ QTAFSALVQP GDYTVVANDF LDTSVVYAVE TPSLLSVPAS GGAELDVTIE ASANLSVRGF PAYLCFGGCA NLTPSNQVDF AAARATSVFD YAGTDGAGDS TVYLTDDPQT RATITLARTV ETQLGNIQPV LPVMVSYTCN LSLGDTPTIL ANADAHAHSF SNYILALNIA MEAVDTEHPV PAGFIVNPDF LGACQQANYG ATYPMPVRGP LQQALDRWSI TAAIPADVSE TIAGYVLAVN WLTRTVAPSV TFGWQINLWG VGFSEWIYAD DIDPAEMAQQ TADYVTSLGV YNAPYAPDFL AIDRYEADDF TQRAYVNGYC YGPREWDRYF DFCKAVSRAL KLPVMPWQMP ASRIPNTTDP VATNFDSQHW GTGGSCLLGD PAIGSDYHNV HPAILALQFP EAFQQSMGAT AEDMFIRSEP FDVSSPLYAD FPLRGIFTVL LGGGATTGIV SAIGNPEPWA RQKLNAYMNK PITFDQ
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