Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3163 |
Symbol | dut |
ID | 6280862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3561454 |
End bp | 3561900 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642622737 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_001896779 |
Protein GI | 187925137 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0058168 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAACTCG ACCTGAAGAT TCTCGACGCG CGCATGCGCG ATCAGCTCCC GGCTTACGCC ACCACCGGCA GCGCGGGCCT CGACCTGCGC GCGTGCCTCG ACGAAGCGTT GACGTTGAAG CCCGGCGAAA CCGCTCTGGT GCCGACGGGT CTGGCGATTC ACGTCGGCGA TGCGGGCTAT GCCGCGCTGA TTCTGCCGCG CTCGGGCCTG GGACATAAGC ATGGAATCGT GCTGGGTAAT CTGGTCGGCC TGATCGATTC CGATTACCAA GGTCAACTGA TGATTTCGAC ATGGAACCGT GGCGAGACCA CGTTCGTGTT GAATCCGATG GAACGTCTTG CGCAACTGGT AATCGTGCCG GTCGTGCAAG CGGAGTTCAA TATCGTCGAC GATTTTGAAA CCAGCGATCG CGGCGCCGGT GGCTTTGGCA GCACAGGCAA GCATTAA
|
Protein sequence | MKLDLKILDA RMRDQLPAYA TTGSAGLDLR ACLDEALTLK PGETALVPTG LAIHVGDAGY AALILPRSGL GHKHGIVLGN LVGLIDSDYQ GQLMISTWNR GETTFVLNPM ERLAQLVIVP VVQAEFNIVD DFETSDRGAG GFGSTGKH
|
| |