| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3155 |
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| Symbol | |
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| ID | 6283684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3551038 |
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| End bp | 3552393 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622729 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001896771 |
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| Protein GI | 187925129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00105623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0641339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC GCCTCTTCCC ACATATGTTC AGCGACCTCA CGCGCGACTT CGGCCAGCCC
GTGATGCTGT GGCAGGTCGG CGTGCTGGTC GCGACGCTCG CGATCGCGTG GCTGCTCGCG
CGCGTGTTGC GCCGCGCGCT GGATCTGCGC CGGCAGACGC GTTACCAGAC GCTGCGTTTC
GGCGCGGAAA GCCTGAATCG CGCGTTCTTT CCGCTGGTCG GCGCGGTCCT CGTGTGGCTT
GCGCGGTCGA TCACCGGCCA GTTCATGCAC ACGGCGCTGC TCGACCTGGC TTTGGTGCCG
CTCTTCGGCA TCGGCTTGAT TTACATCGTG TTTTTCCTCG CGCGACGGGT TTTCAGCCAC
GACGGCGAGA CTCATCCGCT GCTTTTCCTC GTCGAGAAAA TCGTCTCGCT GGTGGTCTGG
GTCGGCATGG TGCTCACGGT GATGGGCATT CAGGACGACG TGATCGCGTG GATGGCCGGC
GTGCATTTCA GCGTCGCCAA CGCGCATCTG ACGCTGCTCT CGCTTATTTC GGGTCTGCTA
TGGGTGTGCG TGACGATGAT CGTCGCAATG TGGCTCGGCT CCACCTTCGA AGACCGCCTG
ATGCGCTCGA AGACGCTCGA CGCCAACCTG AAGGTCGTGG TGGCGCGGGT CGGCCGGGCG
GCGTTCGTGC TGGCGGCGGT GCTGATCAGC CTGTCGCTGG TCGGCATCGA TATCACCGTG
CTGGGCGTGT TCGGCGGCGC GCTGGGTGTC GGGCTCGGCT TCGGCCTGCA GAAGATCGCG
AGCAACTATG TGTCAGGCTT CATCATCCTG ATCGACCGCT CGCTGCGTAT CGGCGACACG
ATCAGCGTGG GCGGCCTGCA GGGCATGGTC ACGCAGATTC GTACGCGCTA CACGGTTGTA
CGCGGGCTGG ACGGCATCGA AACGCTGATT CCGAACGAAA AACTGATTAC GGACGTGGTG
CAGAACCAGT CGTCTTATCT GACGCGTGGT CACGCGAAGG CGGCCGTACA GGTCGCCTAT
ACGTCCGACG TCGAGCAGGC CATGACGTTG CTTGCCGAAG CCGCGCAGGG CGTACCGCGG
GTGCTGCAGG AACCGGCGCC GACAGCTTAT CTTGCGGGTT TCGGCGCGGA CGGTATCAAC
CTCGAACTGG GCTTCTGGAT CGAGGACGCG GCCACCGGCA CTTCGGGCGT GCGCTCGGCT
GTGAACCGCA ATATCTGGCG TTTGTTCTCC GAACACGACA TCACGATTCC ATTCGCGCAA
CGCGAAGTGC GGATCGTCGG CAACGTCAGC GAGGTGATGC CGCAACCGGT AACAATGACC
GCATCGGCAG TCAAGCCGTC CGACAGCGCC CGCTGA
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| Protein sequence | MQNRLFPHMF SDLTRDFGQP VMLWQVGVLV ATLAIAWLLA RVLRRALDLR RQTRYQTLRF
GAESLNRAFF PLVGAVLVWL ARSITGQFMH TALLDLALVP LFGIGLIYIV FFLARRVFSH
DGETHPLLFL VEKIVSLVVW VGMVLTVMGI QDDVIAWMAG VHFSVANAHL TLLSLISGLL
WVCVTMIVAM WLGSTFEDRL MRSKTLDANL KVVVARVGRA AFVLAAVLIS LSLVGIDITV
LGVFGGALGV GLGFGLQKIA SNYVSGFIIL IDRSLRIGDT ISVGGLQGMV TQIRTRYTVV
RGLDGIETLI PNEKLITDVV QNQSSYLTRG HAKAAVQVAY TSDVEQAMTL LAEAAQGVPR
VLQEPAPTAY LAGFGADGIN LELGFWIEDA ATGTSGVRSA VNRNIWRLFS EHDITIPFAQ
REVRIVGNVS EVMPQPVTMT ASAVKPSDSA R
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