Gene Bphyt_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3142 
Symbol 
ID6282919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3537614 
End bp3538387 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID642622716 
ProductABC transporter related 
Protein accessionYP_001896758 
Protein GI187925116 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0168533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA ACATTCGACT GTCCGTGAAG GGCGTGAACA AACGCTTCGG CGGTTTGCAG 
GCGCTGTCCG AGGTCGGACT CGAGATCAAG TCCGGCCAGA TTTACGGTTT GATCGGCCCG
AACGGCGCCG GCAAGACGAC CTTCTTCAAC GTGATCACGG GCTTGTACAC GCCGGATTCG
GGCGAGTTCA AGCTGGACGG CGAGAACTAC ACGCCGACCG CGGTCTATCA GGTGGCGAAG
GCCGGTATCG CGCGCACGTT TCAGAACATC CGTCTGTTCG GCGGCATGAC CGCGCTGGAA
AACGTGATGG TGGGGCGCCA TGTGCGTACG AAACACGGCC TGATCGGCGC AGTGTTCCAG
ACGCCGGCCG AGCGCAAGGA AGAGCGCGAG ATCAAGGAAC GCGCGATCGA ACTGCTGGAG
TACGTCGGCA TTGCGCAGTA CGCGGACTAC ACGTCGCGCA ACCTGTCGTA CGGCCACCAG
CGTCGCCTGG AAATTGCCCG CGCGCTGGCA ACGGATCCGA AGCTGCTCGC GCTGGACGAA
CCGGCGGCCG GCATGAACGC GACGGAAAAG GTCGAGCTGA CCAAGCTGCT CGACAAGATC
CGCGCCGACG GCAAGACGAT CCTGCTGATC GAGCACGACG TGAAACTCGT GATGGGTCTG
TGCAACCAGA TGACGGTGCT CGACTACGGC AAAGTGATTG CGCAAGGTCT GCCGCAGGAC
GTGCAGAAGG ATCCGAAGGT GATCGAAGCT TATCTGGGTG CGGGGGTCCA CTAA
 
Protein sequence
MSDNIRLSVK GVNKRFGGLQ ALSEVGLEIK SGQIYGLIGP NGAGKTTFFN VITGLYTPDS 
GEFKLDGENY TPTAVYQVAK AGIARTFQNI RLFGGMTALE NVMVGRHVRT KHGLIGAVFQ
TPAERKEERE IKERAIELLE YVGIAQYADY TSRNLSYGHQ RRLEIARALA TDPKLLALDE
PAAGMNATEK VELTKLLDKI RADGKTILLI EHDVKLVMGL CNQMTVLDYG KVIAQGLPQD
VQKDPKVIEA YLGAGVH