Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3142 |
Symbol | |
ID | 6282919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3537614 |
End bp | 3538387 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642622716 |
Product | ABC transporter related |
Protein accession | YP_001896758 |
Protein GI | 187925116 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0168533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATA ACATTCGACT GTCCGTGAAG GGCGTGAACA AACGCTTCGG CGGTTTGCAG GCGCTGTCCG AGGTCGGACT CGAGATCAAG TCCGGCCAGA TTTACGGTTT GATCGGCCCG AACGGCGCCG GCAAGACGAC CTTCTTCAAC GTGATCACGG GCTTGTACAC GCCGGATTCG GGCGAGTTCA AGCTGGACGG CGAGAACTAC ACGCCGACCG CGGTCTATCA GGTGGCGAAG GCCGGTATCG CGCGCACGTT TCAGAACATC CGTCTGTTCG GCGGCATGAC CGCGCTGGAA AACGTGATGG TGGGGCGCCA TGTGCGTACG AAACACGGCC TGATCGGCGC AGTGTTCCAG ACGCCGGCCG AGCGCAAGGA AGAGCGCGAG ATCAAGGAAC GCGCGATCGA ACTGCTGGAG TACGTCGGCA TTGCGCAGTA CGCGGACTAC ACGTCGCGCA ACCTGTCGTA CGGCCACCAG CGTCGCCTGG AAATTGCCCG CGCGCTGGCA ACGGATCCGA AGCTGCTCGC GCTGGACGAA CCGGCGGCCG GCATGAACGC GACGGAAAAG GTCGAGCTGA CCAAGCTGCT CGACAAGATC CGCGCCGACG GCAAGACGAT CCTGCTGATC GAGCACGACG TGAAACTCGT GATGGGTCTG TGCAACCAGA TGACGGTGCT CGACTACGGC AAAGTGATTG CGCAAGGTCT GCCGCAGGAC GTGCAGAAGG ATCCGAAGGT GATCGAAGCT TATCTGGGTG CGGGGGTCCA CTAA
|
Protein sequence | MSDNIRLSVK GVNKRFGGLQ ALSEVGLEIK SGQIYGLIGP NGAGKTTFFN VITGLYTPDS GEFKLDGENY TPTAVYQVAK AGIARTFQNI RLFGGMTALE NVMVGRHVRT KHGLIGAVFQ TPAERKEERE IKERAIELLE YVGIAQYADY TSRNLSYGHQ RRLEIARALA TDPKLLALDE PAAGMNATEK VELTKLLDKI RADGKTILLI EHDVKLVMGL CNQMTVLDYG KVIAQGLPQD VQKDPKVIEA YLGAGVH
|
| |