Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3089 |
Symbol | |
ID | 6282870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3482543 |
End bp | 3483772 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622660 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001896705 |
Protein GI | 187925063 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.610477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCCGA TCAAACCGGC GCCCGCCGAT ATCGGCAACG GCGTCATCAA AGCCTTCACG TCGCCGGGCA GTATCCGGCT GACGTCGCTG CCGCCGTTGG CGTTGTACGT GCATTTCCCC TGGTGTGTGC GCAAGTGTCC GTATTGCGAT TTCAACTCGC ACGAATGGAA AGGCGACACG TTCCCGGAAA ACGAGTATCT CGACGCCTTG CGCGCCGATC TGGAGATGGC GCTGCCGCTG GTGTGGGGGC GGCAGGTGCA TACAGTGTTC ATCGGTGGCG GCACGCCCAG TCTGCTTTCG GCGGCAGGGC TCGACCGCAT GCTGTCGGAC GTGCGCGCGC TGCTGCCGCT CGACGCCGAC GCGGAAATCA CACTCGAAGC CAACCCGGGC ACCTTCGAGG CCGCCAAATT CGCCCAGTTT CGCGCGAGCG GCGTGAACCG GCTTTCGGTG GGCATTCAGA GTTTCAATGA AGCGCATCTG AAGGCGCTCG GCCGCATCCA CGATTCGGCG CAGGCGCGCC ATGCCGTCGA AGTCGCCGCG ACCACGTTCG ACAACTTCAA TCTCGATCTG ATGTTCGCGC TGCCGGGACA GACGCTCGCC CAATGCCAAG CCGATGTCGA GACGGCGTTG TCGTTCGCGC CGCCGCATTT GTCGCTGTAC CACCTGACGC TCGAACCGAA CACGTTGTTC GCGAAGTTCC CGCCCGCCCT GCCCGACGCC GATTCATCCG CCGACATGCA GGACTGGATT CACGAGCGCA CCTCCGCGGC GGGCTACGAA CGTTATGAGG TGTCGGCGTA TGCGCGGCCG CATCGGCAGA GCAAGCACAA TCTGAACTAC TGGCGTTTCG GCGACTATCT CGGCATCGGC GCGGGCGCGC ATACGAAGCT GTCGTTTCCG AATCGCGTGC TGCGCCAGGC GCGCTACAAG CATCCCACCA CGTTCATCGA GCGGGCGTTG GCCGGCACGG CAGTGCAGGA AGAGCGCGAA GTCGGGACGC GCGATCTGCC GTTCGAGTTC ATGCTGAACG CGCTGCGGCT GGTGGAAGGG TTTCCGGTGC ATCGATTCAT CGAGCGCACG GGCATGTCGA TGACATCGAT CGAGCCGGCC TTGCAGGAAG CCGAGCGGCG CAAGCTAATC ACGCGCGACC ACGAAAAGAT CGCGCCTACG CCGCTCGGCC AGGCGTTCCT GAATGATTTG CAGGAACTGT TTCTGAAAGA TCCGCAGTGA
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Protein sequence | MIPIKPAPAD IGNGVIKAFT SPGSIRLTSL PPLALYVHFP WCVRKCPYCD FNSHEWKGDT FPENEYLDAL RADLEMALPL VWGRQVHTVF IGGGTPSLLS AAGLDRMLSD VRALLPLDAD AEITLEANPG TFEAAKFAQF RASGVNRLSV GIQSFNEAHL KALGRIHDSA QARHAVEVAA TTFDNFNLDL MFALPGQTLA QCQADVETAL SFAPPHLSLY HLTLEPNTLF AKFPPALPDA DSSADMQDWI HERTSAAGYE RYEVSAYARP HRQSKHNLNY WRFGDYLGIG AGAHTKLSFP NRVLRQARYK HPTTFIERAL AGTAVQEERE VGTRDLPFEF MLNALRLVEG FPVHRFIERT GMSMTSIEPA LQEAERRKLI TRDHEKIAPT PLGQAFLNDL QELFLKDPQ
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