| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3080 |
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| Symbol | |
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| ID | 6283823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3473643 |
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| End bp | 3474788 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622649 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001896696 |
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| Protein GI | 187925054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CACTCATGGT CGCAGCCCTT ACGGGCGTTT GCGCAACCGC TGCGCATGCA
CAAAGCAGCG TCACGCTGTA CGGTTTGATC GACGCCGGCA TTACTTATAC GAACAACCAG
CATGGCCATA GCAACTGGCA GGAAACCAGC GGTTCGGTGA ACGGCAGCCG TTGGGGCCTG
CGTGGGTCGG AAGATCTGGG CGGCGGTCTC AAGGCCATCT TCACGTTGGA AAACGGCTTC
GGCATCAATG ACGGCACGCT CAAGCAAGGC GGTCGCGAAT TCGGCCGTCA AGCGTTTGTG
GGTTTGACGA GCGACCAGTT CGGCGCCGTT ACCCTCGGCC GTCAATACGA CAGCATGGTC
GATTATGTCG GCCCGCTGGC GCTGACCGGC ACCCAATACG GCGGCACCCA GTTCGCGCAC
CCGTTCGACA ACGACAACCT GAACAACTCG TTCCGCGTCA ACAACTCGGT CAAGTACCAG
AGCGTCAACT ACGGCGGCTT CAAGTTCGGC GCGTTGTATG GCTTCTCGAA CCAGGCCGAC
GGTTTCGCCA ACAACCGCGC CTATAGCGCG GGTGCGTCGT ACAACTGGGG CGGCCTGAAC
GTCGCTGCCG CTTACCTGCA ATTGAACAGC AACGGCGCGA CCGGCGCAGC GGCGGCGTTC
AATTCGGGTG GCGCGGTGTC GAGCGACAAC ACGTTCTTCG CCGGCCGCCA GCAAACGTGG
GGCGCGGGTG CCAACTACGC GTTCGGCCCG GCAACGGTCG GCCTCGTGTA CTCGCAAACC
AACCTGTCGA GCCTCGCCGG TATCGGCGCC GGCGCTTCGG GTCAAAGCGG AGGCATCGCC
TTCGGTAACA ACAGCGCTCA CTTCCAGAAC TTCGAAGCGA ACGCTCGCTA TGCGCTGACG
CCGGCGGTCA GCATTGCCGG TTCGTACACG TACACCCGCG CGAGCCTGGC TGGCACCCGT
CCGCACTGGA ATCAGTTCAA CCTGCAAACC GCGTACGCGC TGTCCAAGCG GACCGACGTG
TATCTGCAAG GCGAGTATCA GCAAGTCAAC GAAAACGCTG TCGTGGATGC CGACATCAAC
GGTCTGGGCG CTTCGGGCAA CAACAAGCAA GTCGCTGTGA CCGCAGGTTT GCGTCACCGC
TTCTAA
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| Protein sequence | MKKTLMVAAL TGVCATAAHA QSSVTLYGLI DAGITYTNNQ HGHSNWQETS GSVNGSRWGL
RGSEDLGGGL KAIFTLENGF GINDGTLKQG GREFGRQAFV GLTSDQFGAV TLGRQYDSMV
DYVGPLALTG TQYGGTQFAH PFDNDNLNNS FRVNNSVKYQ SVNYGGFKFG ALYGFSNQAD
GFANNRAYSA GASYNWGGLN VAAAYLQLNS NGATGAAAAF NSGGAVSSDN TFFAGRQQTW
GAGANYAFGP ATVGLVYSQT NLSSLAGIGA GASGQSGGIA FGNNSAHFQN FEANARYALT
PAVSIAGSYT YTRASLAGTR PHWNQFNLQT AYALSKRTDV YLQGEYQQVN ENAVVDADIN
GLGASGNNKQ VAVTAGLRHR F
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