Gene Bphyt_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3033 
Symbol 
ID6281609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3421870 
End bp3423351 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content67% 
IMG OID642622601 
Productpeptidase C26 
Protein accessionYP_001896649 
Protein GI187925007 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.998523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0021965 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGAAA ACAAACCTGA AAATGCCGGC AAGCCCGGCA ACCCCACGCC GCCTTCGGCG 
TCGCCCGCGC CGTCCGGCAC TACGCCCGGC GCGTCGATAG CCGGCTCCGT GCCGCCCGAT
CCGGCGGCCT CGCTACCCCT CTCGCACGAA GATGCCATCC AGTCGCCGGT CAAGGACGTG
ACGCCGCCGG ATGTTGCTTC CACGTCAACG CCGGCTGCCG AAGAAGCCGC CGTGCGATCG
TCGACGGACG ATCCCGACAG CGCGTCGGCG GTCACGCCCA CCGATCCGCA AAAGGCGCGG
CAACGCGATG CCGCCGAAGC ACGCAGCTCG GCTGCTGCAT CCACCGCGAG GCAGGAAGCG
GAGGTTCATG AACGGGACGC GCGCCGCGCC GGCGTCCATG CAATGAGGCC GTCGCCGACT
GTCGGCGGCA GTGAACCCGT GGACGGCGAA CTGGTCGGCG CCGTCGAAGA CGTGACAGTG
AACGAAGAGA TCCCGGCTTC CGCCGAGCGC CGGGCGGGTT CGCCTCCGCC CGGGTTCGGC
GCGGCGCCTG ACTTCACGGC CTCGAACCCG CCGCCGCCCA ACGCCTTGCC GCCGTCGCCG
CCGCCGCGCT ATCTGAAGCA CAGCGATTCG GCGTGGACCG TGTTCGGCCG CATCGTCGCG
GCGCGCGCGC GCCAGATTTT CGATCGCGCG GGCCAGCGGA TCACGCAACG CACGCTGCGC
ATCGGCGTGT CGGCGCGTAT TTTTCATCCC GAGCCGGGGG CGAAGGGACT GCGCGGCAAG
ACCTTGCAGT ACCTCGAGGA ATCAATCGCG CACTGGGTGA TGTCGCGCGA CGTGCTGGTG
TTCATGATTC CGACAGTCGG TCATCAGGGC ATGCTGCATC CGAGCAATAT CCGCTTGCGC
GACTATGCGA AGCATCTCGA CGGCCTGCTG CTGCAAGGCG GCGCCGACGT CTCGCCGCAG
TCCTACGCGG AACAGGCTGC CAGTCACGAA TGGCCGGGCG ACCGCGTGCG CGACATGTAC
GAACTCGAAC TGCTGCATGA GTTCGTCGAG TCGGGCAAGC CGGTGCTCGG CGTGTGCCGT
GGCTGCCAAC TGATCAACGT AGCGTTCGGC GGAACCTTGT ATCAGGACAT CGCCACCGAT
GTGCCGACCG CGGCTACGCA CGTCAACGAG AACTACGATC AGCATCGGCA CGGCATTCAT
TTCCCGGACG GTTCGACGCT CGCCAACATG TTCCCCGGCC GGCGCGATGC GATCGTCAAC
TCGATTCACC ACCAGGCGGT CAAGACGCTC GGCCGCGATC TCAATATCGA AGCGGTGTCG
GCGTCGGACG GCATCATCGA AGCCGTGCGC TACCGGCGCG CGCCGTTCGT GATGGGCGTG
CAATGGCACC CGGAGTTTCA TCGCGCGGGC GGGCCGGAGT TGCTCGACTG CACGCCGCTG
CTCGATACGT TCCTGCGTGT GGCGCGCGAG ACGCGGTTTT AA
 
Protein sequence
MSENKPENAG KPGNPTPPSA SPAPSGTTPG ASIAGSVPPD PAASLPLSHE DAIQSPVKDV 
TPPDVASTST PAAEEAAVRS STDDPDSASA VTPTDPQKAR QRDAAEARSS AAASTARQEA
EVHERDARRA GVHAMRPSPT VGGSEPVDGE LVGAVEDVTV NEEIPASAER RAGSPPPGFG
AAPDFTASNP PPPNALPPSP PPRYLKHSDS AWTVFGRIVA ARARQIFDRA GQRITQRTLR
IGVSARIFHP EPGAKGLRGK TLQYLEESIA HWVMSRDVLV FMIPTVGHQG MLHPSNIRLR
DYAKHLDGLL LQGGADVSPQ SYAEQAASHE WPGDRVRDMY ELELLHEFVE SGKPVLGVCR
GCQLINVAFG GTLYQDIATD VPTAATHVNE NYDQHRHGIH FPDGSTLANM FPGRRDAIVN
SIHHQAVKTL GRDLNIEAVS ASDGIIEAVR YRRAPFVMGV QWHPEFHRAG GPELLDCTPL
LDTFLRVARE TRF