Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3022 |
Symbol | |
ID | 6282300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3406554 |
End bp | 3408116 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622590 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001896638 |
Protein GI | 187924996 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.689492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00492897 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCGCA TCTACGTTCC CCGCGATTCG TCGGCGTTGG CGCTGGGCGC TGACGCGCTC GCACAGGCAA TTGAAAACGA AGCAGCACGC CGTGGCCTCG CCATCGAACT GGTTCGTAAC GGTTCGCGCG GCTTGCTGTG GCTCGAACCG CTCGTTGAAG TTCAGACCTC TGAAGGCCGC ATCGGCTATG CGAATATCGA AGCCGGCGAT GTCTCGGCGC TGTTCGACGC CGGCTTCCTT GAAGGGGGCG CGCACGCAAA CCGCGTCGGC GTGGTCGACG CGATTCCGTA TCTGAAGAAG CAGCAGCGCC TGACGTTCGC CCGGATCGGC ATTACAGACC CGCTTTCCAT CGACGACTAC GTCGCCCACG GCGGCCTCGA AGGCTTGCGC AACGCTTTGC AAACCGACGG CGACGCCGCC TGCGAAGCCT TGATCGAATC CGGCCTGCGC GGCCGCGGCG GCGCGGCCTT CCCCGCCGGC ATCAAATGGC GCACGGTGCG CGGCGCCAAG GCGGCGCAGA AGTACATCGT CTGCAACGCG GACGAAGGCG ATTCCGGCAC ATTCTCCGAT CGCCTCGTGA TGGAAAGCGA TCCGTACGTG CTGATCGAAG GCATGATCAT CGCGGGTGTC GTGACCGGCG CGACGGTCGG CCATATCTAC GTGCGCAGCG AGTATCCGCA TTCGATCGCC ACGCTCGAAG CCGCCATCGC CAAAGCGCGC GCCGCCGGCT GGCTCGGCGA CCGCGTGCTC GGCTCGGCAC ATCGCTTCGA ACTGTTCGTC GCGAAAGGCG CCGGCGCTTA CGTATGCGGC GAGGAAACGG CGCTGCTCGA ATCGCTCGAA GGTAAGCGCG GCATCGTGCG CGCCAAGCCG CCGGTGCCGG CGCTCGTCGG CCTGTTCGGC CAGCCGACCG TGATCAACAA CGTCATCACG CTCGCCACGG TGCCGATCAT CTTCGCGCGC GGCGCGGCGT TCTACAAAGA CTTCGGCATG GGCCGCTCGC GCGGCACGCT GCCGTTCCAA CTCGCGGGCA ATGTGAAGCA AGGCGGCCTG GTCGAACTCG CGTTCGGCGT GACGCTGCGC GAATTGCTGT ACGACTACGG CGGCGGCACG GCGAGTGGCC GGCCGGCGCG CGCGGTACAA GTGGGCGGCC CGCTGGGCAC GTATCTGCCG GAAAGCCAAT GGGACATTCC CATGGACTAC GAGGCGTACG CGGCAGTCGG CGCGGTGGTG GGTCACGGCG GCCTCGTCGT GCATGACGAC ACCTCGAATC TCGCCGAACT CGCGCAGTAC GCCATGCACT TTTGCGCGCT CGAATCGTGC GGCAAATGCA CGCCGTGCCG GATCGGCTCG ACGCGCGGCG TCGAAGTGAT CGGACGGATT CGCAACGGCG ACACGTCCAC ACGACAAGTG CAGTTGCTGC GCGATCTGTG CGACACGATG GTGTCCGGTT CGCTGTGCGC GATGGGCGGC ATGACCCCGT TCCCGGTGTT GTCCGCGCTC GATCATTTCC CCGAAGACTT CGGTCTCGCC GACGTATCTC ATCACACGCC GAAAGCGGCC TGA
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Protein sequence | MTRIYVPRDS SALALGADAL AQAIENEAAR RGLAIELVRN GSRGLLWLEP LVEVQTSEGR IGYANIEAGD VSALFDAGFL EGGAHANRVG VVDAIPYLKK QQRLTFARIG ITDPLSIDDY VAHGGLEGLR NALQTDGDAA CEALIESGLR GRGGAAFPAG IKWRTVRGAK AAQKYIVCNA DEGDSGTFSD RLVMESDPYV LIEGMIIAGV VTGATVGHIY VRSEYPHSIA TLEAAIAKAR AAGWLGDRVL GSAHRFELFV AKGAGAYVCG EETALLESLE GKRGIVRAKP PVPALVGLFG QPTVINNVIT LATVPIIFAR GAAFYKDFGM GRSRGTLPFQ LAGNVKQGGL VELAFGVTLR ELLYDYGGGT ASGRPARAVQ VGGPLGTYLP ESQWDIPMDY EAYAAVGAVV GHGGLVVHDD TSNLAELAQY AMHFCALESC GKCTPCRIGS TRGVEVIGRI RNGDTSTRQV QLLRDLCDTM VSGSLCAMGG MTPFPVLSAL DHFPEDFGLA DVSHHTPKAA
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