| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3012 |
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| Symbol | |
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| ID | 6281024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3398847 |
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| End bp | 3399560 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622582 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001896630 |
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| Protein GI | 187924988 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0258131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0275568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC CCACGCCCCT GCCCCAACGC GAAGACAACG AAGATGCACT CGGTCTTTGC
CACGCCGTCC TGTTCGACCT CGACGGCACG CTAGCCGACA CGGCGCCCGA CCTCGCGGCG
GCCGTCAACA AGATGCGCCA CGATCGCGGG CTCGAGATGG TACCGCTCGA AGATCTGCGC
CCGCTTGCGT CCGCGGGCGC GCGCGGGCTG ATTGGCGGCG CGTTCGGAAT CGGCCCCGAT
AGCCACGAGT TCGCGTCGAT GCGCGAGGAG TTCCTCGCCA ACTATGAGGC GGACCTGTGC
ATCGAGACCA CGCTGTTTCC AGGCATCCCC GAGATACTCG ACGAGCTGGA CGCACGCGGT
GTGCGCTGGG GCATCGTCAC GAACAAAGTG GCGCGGCTTA CCGAGCCGCT GATCGCACAA
CTCGGCCTTG AAGAGCGCGC AGGTTGCGTC GTGAGCGGCG ACACTACGCC GCATTCGAAA
CCGCACCCAG CGCCATTGCT GCACGCGGCG CGCGAACTGG ACGTGATGCC GGAGCGCATC
GTCTACGTCG GCGACGATTT GCGCGACGTG CAGGCTGGTT TCGCCGCCGG CATGAAGACG
GTCGCGGCGG CGTACGGCTA CTGCGGCAAC GACATCCCGC CGACGCAATG GCATGCGCAA
CACGTCGTCC AATCGCCGGC GGAGTTGCAG AGGCTGCTGC GCGACCTCGG CTGA
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| Protein sequence | MSDPTPLPQR EDNEDALGLC HAVLFDLDGT LADTAPDLAA AVNKMRHDRG LEMVPLEDLR
PLASAGARGL IGGAFGIGPD SHEFASMREE FLANYEADLC IETTLFPGIP EILDELDARG
VRWGIVTNKV ARLTEPLIAQ LGLEERAGCV VSGDTTPHSK PHPAPLLHAA RELDVMPERI
VYVGDDLRDV QAGFAAGMKT VAAAYGYCGN DIPPTQWHAQ HVVQSPAELQ RLLRDLG
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