| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2998 |
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| Symbol | |
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| ID | 6283547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3382413 |
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| End bp | 3383588 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622568 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001896616 |
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| Protein GI | 187924974 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0827469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0038903 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTAG ACTTCTGGTG GCTGCTCGTC ATACCCGTCG CGTTCGCGTT CGGCTGGATG
GCCGCGCGCT ACGACCTCAA GACGCTGCTG TCCGAAAGCG CCAACCTGCC GCGTTCGTAT
TTTCGCGGCC TGAACTTCCT GCTTAACGAG CAACCCGACC AGGCAATCGA CGCGTTCATC
GAAGTGGTCA AGCTCGATCC GGAAACGGTC GAGTTGCACT TCGCGCTGGG CAATCTGTTC
CGTCGCCGCG GCGAAACGGA CCGCGCGATT CGCGTGCATC AGAACCTGTT GAGCCGTGCC
GATCTGCCGG TCAGCGAGCG CGATCACGCA CTCTACGAGC TGGGGCAAGA CTTCCTGAAG
GCGGGTCTGC TCGATCGCGC GGAAGAAACG TTCCGCTCGC TCGAAACCGG CGACTACGCG
TTGGGCGCGC AGCGCGCGCT GCTCACCATC TACGAGATCG AGAAGGACTG GGTCAAGTCG
ATCGATACGG CCCGCCATCT GGAAACGATG GGCGCCGAGT CGCTGGACAA GGAAATCGCG
CAGTTCCACT GCGAACTCGC CCAGGAAGCG CTACAACAGA AGAAGCCGGA CGAAGCCCGC
CGCCAGCTCG GCTTCGCGCT GAAGGCGAAC CCGACCAACG TACGCGCCAC GATCCTGTTC
GGCGACGTCG ACGCGGCCGG CGGCGCGCAG GAAGCGGCCA TCGCCCAATG GCGCCGGGTG
GAGGAGCAGA ATCCGGCCTA TCTGCCGCTG GTCGCGGAAA AGTTGATGAA GGCCTACGAG
GCGCTCGGAC GCCCGCAAGA TGGCGCTGAT CTGCTCACCA CGTGGGTGGA CCGCTATCCG
ACCAACGACC TGCTCGATGT TGCCTATCAG CACGTCGCCT CGTTGCGCGG ACCTGACGCC
GCCCACGCGC TGGCGCGTTC GCAAATGCAG AAGTCGCCGA ATCTGGCGGG CATGACGCGG
CTGCTCGAAG CGCAGGAAGC CGTCGCGGAA GAACCGCGGC GCAGCGAACT CGAACTGATG
CGCACGCTGA TCCGCCAGCG CACCAAAAAT CTGCCACGGT ATACGTGCCA GAATTGCGGT
TTCAGGGCGC GGCTTTTCTA CTGGCAGTGC CCGGGTTGCA GCGGTTGGGA AACCTATGCG
CCGCGCCGCA TCGAGCCAAT TACCGCATCG AACTGA
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| Protein sequence | MDLDFWWLLV IPVAFAFGWM AARYDLKTLL SESANLPRSY FRGLNFLLNE QPDQAIDAFI
EVVKLDPETV ELHFALGNLF RRRGETDRAI RVHQNLLSRA DLPVSERDHA LYELGQDFLK
AGLLDRAEET FRSLETGDYA LGAQRALLTI YEIEKDWVKS IDTARHLETM GAESLDKEIA
QFHCELAQEA LQQKKPDEAR RQLGFALKAN PTNVRATILF GDVDAAGGAQ EAAIAQWRRV
EEQNPAYLPL VAEKLMKAYE ALGRPQDGAD LLTTWVDRYP TNDLLDVAYQ HVASLRGPDA
AHALARSQMQ KSPNLAGMTR LLEAQEAVAE EPRRSELELM RTLIRQRTKN LPRYTCQNCG
FRARLFYWQC PGCSGWETYA PRRIEPITAS N
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