| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2981 |
|---|
| Symbol | |
|---|
| ID | 6280747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3364185 |
|---|
| End bp | 3364673 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642622551 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_001896599 |
|---|
| Protein GI | 187924957 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.160309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00904587 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACAC AGCGCCAACC GGTCCGGGCT CTCGACAAAC TCGATCGCAA GATCCTGCGG
CTGCTGCAAC AAGACGGCCG CATGGCCATG AAGGACCTGG CCGAACAGGT CGGACTGTCC
GTCACGCCGT GCATCGAGCG CGTCAAGCGG ATGGAGCGCG ACGGCGTGAT CACCGGCTAC
TACGCGCGCG TGAATCCGGC GGAGTTGGGC GCGGCGCTGC TGGTGTTCGT CGAGATCACG
CTGGATCACA AGAGCGGCAA CATGTTCGAC CAGTTCCGCC GCGAGGTGCA GAAGATCCCC
GAGGTGCTGG AATGTCACCT GGTGTCGGGC GATTTCGACT ATCTGATCAA GGCGCGCATC
GGCGAAATGG CCGATTACCG CAAGCTGCTC GGCGACATCC TGCTGCAGTT GCCCGGTGCG
GTGCAGTCGA AAAGCTATGT CGTGATGGAG GAGATCAAGG AAACGCTGAT GATTCCGGTA
GGGGATTGA
|
|---|
| Protein sequence | MRTQRQPVRA LDKLDRKILR LLQQDGRMAM KDLAEQVGLS VTPCIERVKR MERDGVITGY
YARVNPAELG AALLVFVEIT LDHKSGNMFD QFRREVQKIP EVLECHLVSG DFDYLIKARI
GEMADYRKLL GDILLQLPGA VQSKSYVVME EIKETLMIPV GD
|
|---|
| |