Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2931 |
Symbol | |
ID | 6284418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3312804 |
End bp | 3313466 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642622499 |
Product | protein of unknown function DUF162 |
Protein accession | YP_001896549 |
Protein GI | 187924907 |
COG category | [S] Function unknown |
COG ID | [COG1556] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00316375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAT CGCTCGCACG CCGCAACATC CTGGCGCGCA TTCGCGCGGC ACAAGGGCGT GAGCCCAAGC CGTCAGCTTC CGAGCGCGAG GCCGCCGCGG ACTATCTCGC GCGCCATCCT GCCGGCCCGC GTCCGGAGAT GCCGGTTGAC CTCGTTGCGC ACTTCATTGA AGAAGCGCAA AAAATGGCGA CCACGGTGGA CTCGGTTGCA GCACTGAGCG ACGTGCCGGC CGCGGCGCAC CGCTACCTCA CGCAGCATGC ATTGCCGCTG CAAGCCATCG CCTGGCAAAC GCTGCAAGAT CTGCATTGGG CCGAAGCCGG CCTCACCGTC GAATTTCGCA AGCCGCAAGA CGGCGACGTA GTCGGTCTTA CCGGCTGCTT CTGCGCGACC GCCGAGACCG GCACGCTAGT GCTGCTGTCG GGACCGGAAA CTTATGCGTC GGCCGGTCTG CTTCCGGAAA CGCACATTGC GATCGTGCCG GCTTCTCGCA TCGTCTCGGG TCACGAAGAG GCGTTCGCAC TGATCCGCAA GGAACGCGGC GAACTGCCGC GCGCGGTCAA CTTCGTCTCC GGGCCTTCGC GGACCGGCGA TATCGAACAG ACCATCGTGC TCGGCGCGCA TGGGCCTTAC CGGGTGCATG TGATCGTCGT GCAGGGCGCC TGA
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Protein sequence | MDTSLARRNI LARIRAAQGR EPKPSASERE AAADYLARHP AGPRPEMPVD LVAHFIEEAQ KMATTVDSVA ALSDVPAAAH RYLTQHALPL QAIAWQTLQD LHWAEAGLTV EFRKPQDGDV VGLTGCFCAT AETGTLVLLS GPETYASAGL LPETHIAIVP ASRIVSGHEE AFALIRKERG ELPRAVNFVS GPSRTGDIEQ TIVLGAHGPY RVHVIVVQGA
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