Gene Bphyt_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2931 
Symbol 
ID6284418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3312804 
End bp3313466 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID642622499 
Productprotein of unknown function DUF162 
Protein accessionYP_001896549 
Protein GI187924907 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00316375 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAT CGCTCGCACG CCGCAACATC CTGGCGCGCA TTCGCGCGGC ACAAGGGCGT 
GAGCCCAAGC CGTCAGCTTC CGAGCGCGAG GCCGCCGCGG ACTATCTCGC GCGCCATCCT
GCCGGCCCGC GTCCGGAGAT GCCGGTTGAC CTCGTTGCGC ACTTCATTGA AGAAGCGCAA
AAAATGGCGA CCACGGTGGA CTCGGTTGCA GCACTGAGCG ACGTGCCGGC CGCGGCGCAC
CGCTACCTCA CGCAGCATGC ATTGCCGCTG CAAGCCATCG CCTGGCAAAC GCTGCAAGAT
CTGCATTGGG CCGAAGCCGG CCTCACCGTC GAATTTCGCA AGCCGCAAGA CGGCGACGTA
GTCGGTCTTA CCGGCTGCTT CTGCGCGACC GCCGAGACCG GCACGCTAGT GCTGCTGTCG
GGACCGGAAA CTTATGCGTC GGCCGGTCTG CTTCCGGAAA CGCACATTGC GATCGTGCCG
GCTTCTCGCA TCGTCTCGGG TCACGAAGAG GCGTTCGCAC TGATCCGCAA GGAACGCGGC
GAACTGCCGC GCGCGGTCAA CTTCGTCTCC GGGCCTTCGC GGACCGGCGA TATCGAACAG
ACCATCGTGC TCGGCGCGCA TGGGCCTTAC CGGGTGCATG TGATCGTCGT GCAGGGCGCC
TGA
 
Protein sequence
MDTSLARRNI LARIRAAQGR EPKPSASERE AAADYLARHP AGPRPEMPVD LVAHFIEEAQ 
KMATTVDSVA ALSDVPAAAH RYLTQHALPL QAIAWQTLQD LHWAEAGLTV EFRKPQDGDV
VGLTGCFCAT AETGTLVLLS GPETYASAGL LPETHIAIVP ASRIVSGHEE AFALIRKERG
ELPRAVNFVS GPSRTGDIEQ TIVLGAHGPY RVHVIVVQGA