Gene Bphyt_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2918 
Symbol 
ID6281681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3297421 
End bp3298425 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content60% 
IMG OID642622486 
Productpeptidase S49 
Protein accessionYP_001896536 
Protein GI187924894 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0232631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA ATTTGACTCC CGAGCCGAAG GAACCGTCTC TGAATGGTCG CCCCAGCAAG 
CCTGCCGATG AGCCGGGCTG GGAACGCGCC GCGCTCGAAC GTATCGCGCT CGCGGCGATC
AACGAGCAGC GCGCGGCGCG GCGCTGGAAG ATTTTTTTCC GGTTTGTTTT TCTGGTGGTA
GTGCTGCTGG CGATCTGGGC GGCTATTGAC TTCTCCGGGG ACAAGGTCGC CGCCACCGGC
CGGCACACGG CTATGGTGAC GTTAGACGGC GAGATATCCG CGGATACGAA TGCGAACGCG
GAAGATGTCA ACACGGCGTT GCAAAGCGCG TTCGACGACG CGGGCACGGC AGGCGTGATC
CTGCGCTGCA ATAGTCCGGG TGGCAGTCCG GTACAAGCGG GGATCATTTA CAACGAAATT
CGTCGATTGC GCGCCAAATA CCCGTCAATT CCGCTGTATG TGGTTGTGGG CGACATGTGC
GCGTCCGGCG GATACTACGC GGCGGCGGCG GCTGACAAGA TTTATGTCGA TAAGGCGAGC
ATCGTGGGTT CGATCGGCGT GCTGATGGAC AGCTTCGGAT TCACCGGCCT GATGGATAAA
CTGGGGATTC AGCGGCGTTT GCATACATCT GGCGAGAACA AGGGTTTTTT CGATCCGTTC
TCGCCGGAAA CGCCGAAGAT GGACGAACAT GCTCAGGATA TGCTCGATCA GATCCACGCC
CAGTTCATCG ACGCAGTGCG TCAGGGGCGC GGCAAGCGCC TGCACGAAAC GCCAGACATG
TTCTCCGGCC TCTTCTGGAC TGGCCAAAAG AGCGTCGAAC TTGGCCTCGC CGACGGTTTG
GGCGACGCCG ACTATGTGGC CCGCGACCTG TTCAAGGCCC CGGATATTGT TGATTACACG
GTGAAAGAGA GCATTACGGA CCGTGTTGCG CGCAAGTTCG GCGCGGCTGT CGGTAGCGGC
GCGGTTCACG CCATGGCGCT TGGTGGGAAG ATGAATTTGC GTTGA
 
Protein sequence
MSDNLTPEPK EPSLNGRPSK PADEPGWERA ALERIALAAI NEQRAARRWK IFFRFVFLVV 
VLLAIWAAID FSGDKVAATG RHTAMVTLDG EISADTNANA EDVNTALQSA FDDAGTAGVI
LRCNSPGGSP VQAGIIYNEI RRLRAKYPSI PLYVVVGDMC ASGGYYAAAA ADKIYVDKAS
IVGSIGVLMD SFGFTGLMDK LGIQRRLHTS GENKGFFDPF SPETPKMDEH AQDMLDQIHA
QFIDAVRQGR GKRLHETPDM FSGLFWTGQK SVELGLADGL GDADYVARDL FKAPDIVDYT
VKESITDRVA RKFGAAVGSG AVHAMALGGK MNLR