Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2918 |
Symbol | |
ID | 6281681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3297421 |
End bp | 3298425 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642622486 |
Product | peptidase S49 |
Protein accession | YP_001896536 |
Protein GI | 187924894 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0232631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA ATTTGACTCC CGAGCCGAAG GAACCGTCTC TGAATGGTCG CCCCAGCAAG CCTGCCGATG AGCCGGGCTG GGAACGCGCC GCGCTCGAAC GTATCGCGCT CGCGGCGATC AACGAGCAGC GCGCGGCGCG GCGCTGGAAG ATTTTTTTCC GGTTTGTTTT TCTGGTGGTA GTGCTGCTGG CGATCTGGGC GGCTATTGAC TTCTCCGGGG ACAAGGTCGC CGCCACCGGC CGGCACACGG CTATGGTGAC GTTAGACGGC GAGATATCCG CGGATACGAA TGCGAACGCG GAAGATGTCA ACACGGCGTT GCAAAGCGCG TTCGACGACG CGGGCACGGC AGGCGTGATC CTGCGCTGCA ATAGTCCGGG TGGCAGTCCG GTACAAGCGG GGATCATTTA CAACGAAATT CGTCGATTGC GCGCCAAATA CCCGTCAATT CCGCTGTATG TGGTTGTGGG CGACATGTGC GCGTCCGGCG GATACTACGC GGCGGCGGCG GCTGACAAGA TTTATGTCGA TAAGGCGAGC ATCGTGGGTT CGATCGGCGT GCTGATGGAC AGCTTCGGAT TCACCGGCCT GATGGATAAA CTGGGGATTC AGCGGCGTTT GCATACATCT GGCGAGAACA AGGGTTTTTT CGATCCGTTC TCGCCGGAAA CGCCGAAGAT GGACGAACAT GCTCAGGATA TGCTCGATCA GATCCACGCC CAGTTCATCG ACGCAGTGCG TCAGGGGCGC GGCAAGCGCC TGCACGAAAC GCCAGACATG TTCTCCGGCC TCTTCTGGAC TGGCCAAAAG AGCGTCGAAC TTGGCCTCGC CGACGGTTTG GGCGACGCCG ACTATGTGGC CCGCGACCTG TTCAAGGCCC CGGATATTGT TGATTACACG GTGAAAGAGA GCATTACGGA CCGTGTTGCG CGCAAGTTCG GCGCGGCTGT CGGTAGCGGC GCGGTTCACG CCATGGCGCT TGGTGGGAAG ATGAATTTGC GTTGA
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Protein sequence | MSDNLTPEPK EPSLNGRPSK PADEPGWERA ALERIALAAI NEQRAARRWK IFFRFVFLVV VLLAIWAAID FSGDKVAATG RHTAMVTLDG EISADTNANA EDVNTALQSA FDDAGTAGVI LRCNSPGGSP VQAGIIYNEI RRLRAKYPSI PLYVVVGDMC ASGGYYAAAA ADKIYVDKAS IVGSIGVLMD SFGFTGLMDK LGIQRRLHTS GENKGFFDPF SPETPKMDEH AQDMLDQIHA QFIDAVRQGR GKRLHETPDM FSGLFWTGQK SVELGLADGL GDADYVARDL FKAPDIVDYT VKESITDRVA RKFGAAVGSG AVHAMALGGK MNLR
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