Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2873 |
Symbol | |
ID | 6281902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3249792 |
End bp | 3250238 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622437 |
Product | Ribonuclease H |
Protein accession | YP_001896491 |
Protein GI | 187924849 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00808472 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.318566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCCG ATCTCATCGA TATTTATACC GACGGCGCCT GCAAGGGCAA CCCCGGCCCC GGCGGCTGGG GCGCGCTGCT GCGCTTCGGC GACCAGGAAA AAGAACTGTT CGGCGGCGAA GCCAACACCA CCAACAACCG CATGGAACTG ATGGGCGTGA TCGCCGCGCT GGAAGCGCTG AAGCGCCCTT GCAAAGCGGT CGTGCACACC GACTCACAGT ACGTGCAGAA AGGCATCAGC GAATGGATCC ACGGCTGGAA GAAGAAAGGC TGGATCACCG CCGCCAAGCA GCCGGTCAAG AACGCCGACT TGTGGAAGCG GCTCGACGCA CTCGTCGCGC AACACGAAAT CGAATGGCGC TGGGTGCGCG GGCACAACGG CCACCCGGAA AACGAGCGCG CCGATCAGCT GGCCAATCGC GGCGTCGCAT CACTCGCGCA GCTGTAA
|
Protein sequence | MTSDLIDIYT DGACKGNPGP GGWGALLRFG DQEKELFGGE ANTTNNRMEL MGVIAALEAL KRPCKAVVHT DSQYVQKGIS EWIHGWKKKG WITAAKQPVK NADLWKRLDA LVAQHEIEWR WVRGHNGHPE NERADQLANR GVASLAQL
|
| |