| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2853 |
|---|
| Symbol | |
|---|
| ID | 6280847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3225241 |
|---|
| End bp | 3225942 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642622417 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_001896471 |
|---|
| Protein GI | 187924829 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGCA GCATTCTCGT CATTGAAGAT GAGCCCGCCA TTTCCGAACT GATTTCGGTC
AATCTTCAAC ACGCCGGACA CTGCCCGATT CGCGCGTACA ACGCGGAGCA GGCGCAGAAC
CTGATCAGCG ACGTATTGCC CGACCTCGTC CTGCTCGACT GGATGTTGCC GGGTAAATCG
GGCATCGCGT TCGCTCGCGA TCTGCGCAAC AACGAGCGCA CGAAACATAT CCCGATCATC
ATGCTGACCG CGCGTGGCGA CGAGCAGGAC AAGGTGCTCG GCCTCGAAAT CGGCGCCGAC
GACTACGTCA CCAAGCCGTT CTCGCCGAAA GAACTGATGG CGCGCATCAA GGCGGTATTG
CGCCGCCGTG CGCCGCAGCT GACCGAAGAC GTGGTCGCGA TCAACGGTCT CAAGCTCGAC
CCGGCGACGC ACCGCGTGGC CGCCCATGCG GAAGGCAGCG AGATCAAGCT CGATCTCGGC
CCGACGGAAT TCCGCCTGCT GCACTTTTTC ATGACGCATC CCGAGCGCGT GCACAGCCGC
ACGCAACTGC TCGATCAGGT GTGGGGCGAC CACGTGTTCG TCGAAGAGCG CACGGTAGAC
GTGCATATCA AGCGTTTGCG CGCGGCCCTC AAGCCGGCCG GGTGCGATGC TATGATTGAG
ACGGTACGCG GCAGCGGCTA CCGGCTTGCG AAGAGCGCCT GA
|
|---|
| Protein sequence | MPSSILVIED EPAISELISV NLQHAGHCPI RAYNAEQAQN LISDVLPDLV LLDWMLPGKS
GIAFARDLRN NERTKHIPII MLTARGDEQD KVLGLEIGAD DYVTKPFSPK ELMARIKAVL
RRRAPQLTED VVAINGLKLD PATHRVAAHA EGSEIKLDLG PTEFRLLHFF MTHPERVHSR
TQLLDQVWGD HVFVEERTVD VHIKRLRAAL KPAGCDAMIE TVRGSGYRLA KSA
|
|---|
| |