Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2808 |
Symbol | |
ID | 6282757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3174253 |
End bp | 3175119 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642622370 |
Product | ABC transporter related |
Protein accession | YP_001896426 |
Protein GI | 187924784 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.163546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.337543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATA TGAATACCGC GGCGAACGCC TTGCCTGAAT CGAACGCAAA CGCGAACGCG AATGCCACCG CAGCCGCGCC GCAGGAAGAC GTGATCCTCG CGCTGGAGAA CGTCAACAAA TACTTCGGCA AGGTCATCGC GCTAAGCGGC GTGACCTTGC GCCTGAAACG CGGCGAAGTG CACTGCCTGC TCGGCGACAA CGGCGCGGGC AAGTCGACGC TGATCAAAAC GCTTGCCGGC GTGCATCAAC CCTCTTCCGG ACAATATCTG GTGGACGGCA AACCGGTGCT GTTCGAGTCG CCCAAAGATG CGCTCGATCT CGGCATCGCC ACCGTGTATC AGGATCTCGC GCTGGTGCCG CTACTCTCCG TGGCGCGCAA CTTTTTCATG GGACGCGAGC CGCAAAAGAA GTTGTTCGGT TTCCTGAGCG TAATGGACCT CGAAACGAGC GCCACCACCG CGCGCGACAA GCTCGCCGAA ATGGGCATCA ACGTGCGCGA CGCGCATCAG CCGATCGGCA CCATGTCCGG CGGCGAGAAG CAATGTCTCG CGATTGCGCG GGCGATTCAC TTCGGCGCAC GTGTGCTGAT TCTCGACGAG CCGACCGCCG CGCTCGGCGT GAAGCAGAGC TTCAACGTGC TCAAGCTGAT TCACAAAGCG CGCGCCAAGG GCATCTCGGT GATCTTCATT ACGCACAACG TGCACCACGC GTATCCGATC GGCGATTCGT TCACGGTGCT CAATCGCGGC AAATCGCTCG GCACGTTCAC CAAGGAAACC ATCAGCAAGG ACGAAGTGCT CGACATGATG GCCGGCGGCG CCGAGATGCA GAAGATGATC GGCGAACTCG AAGGCGCGAC GATCTGA
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Protein sequence | MSDMNTAANA LPESNANANA NATAAAPQED VILALENVNK YFGKVIALSG VTLRLKRGEV HCLLGDNGAG KSTLIKTLAG VHQPSSGQYL VDGKPVLFES PKDALDLGIA TVYQDLALVP LLSVARNFFM GREPQKKLFG FLSVMDLETS ATTARDKLAE MGINVRDAHQ PIGTMSGGEK QCLAIARAIH FGARVLILDE PTAALGVKQS FNVLKLIHKA RAKGISVIFI THNVHHAYPI GDSFTVLNRG KSLGTFTKET ISKDEVLDMM AGGAEMQKMI GELEGATI
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