Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2722 |
Symbol | |
ID | 6281108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3075425 |
End bp | 3077011 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622282 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001896340 |
Protein GI | 187924698 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGG ACAACAACAA GGTGCGTTTT TCGCACAACG ACGACAGGGT CGTCGTGATC ATCGGCTCCG GCGCGGGCGG CGGCACGCTC GCCAACGAGC TGGCGCAGAA GGGCATCAAC GTCGTGGTGC TGGAAGCGGG CAAGCTGCAT ACGCAGGGCG ATTTCACGAC CGACGAATGG GGCGCGTTCC AGATGCTGTC ATGGCTCGAC AAACGCACCA CGTCGGGCAG TTGGCGCATC GCCAAGGACT TCCCGAATCT GCCCGCGTGG ATCTGCAAGA CGGTGGGCGG CACGACCACG CACTGGGCCG GCGCGAGTCT GCGCATCCAG CCGTACGAGT TCAAGGCAAA GACGACCTAC GGCGATATCA AGGACGCCAA TCTGCTCGAC TGGCCGGTTA CGCGTGAAGA ACTCGATCCA TACTACGACC GCGCTTCGCA GAAAATGGGC GTGACGCGCA CCAATGGTTT GCCGGGCCTG CCGGGCAACA ACAACTTCAA GGTAATGTCG GCCGGCGCGA TGAAAGTCGG CTACAAGGAT TGCAATACCG GCCACATGGC GATCAATAGC GTGGTGCGCG ACGACCGCGC GCATTGCTTC CAGCGCGGCT TCTGTTTTCA GGGCTGCCGT ACGGGCGCGA AGTGGTCGAC GCTCTACACC GAATTGCCGC GCGCTCAGGC AACCGGCCAT ATGGAGTTGC GCACACAGGC CCACGTGGTG CGTATCGAAA CCGATGCGCG CGGCAAGGCG AAGGAGGTGC TCTATTACGA CGGCAACGGC AAATTGCAGC GGCAGAAGGC ACGCGTTGTC GCGGTGGCCG GCAACTCGAT CGAGACGCCG CGGCTGTTGC TGAACTCGCA TTCGAGCAAA TTCCCGCAGG GGCTCGCGAA CGGCTCGGGC CAGGTGGGCC GCAACTATAT GCGTCACACC ACGGGCTCGG TGTATGCGGT GTTCAACGAC AAGGTGGAGA TGTTCAAGGG CACCACGATG GCCGGCATCA TCGAGGACGA AGCGGTGTTC AATCCGCAGC GCGGCTTCGC GGGCGGCTAC CACATGGAGA CCGTGTCGCT CGGCCTGCCG TTTTACGCGG CCTTTCTGAA TCCGGGCGCA TGGGGGCCGA CCTTCAGCCA GGCGATGGAT CAATACGCGT ACACGGCGGG CATGTGGATC GTCGGTGAGG ACATGCCGCG CGAGAGCAAT CGCGTGACCT TGAACACGGA CGTGAAGGAT CAGTACGGCC AGCCGGTCGC CAACGTGCAT TTCGACGATC ACCCGAACGA CGAAGCGATG CGCGACCACG CCTACAAGCA GGGCACGGCA GTGTATGAAG CGGCGGGCGC GAAGACGGTG TATCGCGTGC CGCCGTATCC GTCCACGCAC AATCTCGGCA CCGCCCGCAT GAGCGCGCGC GCCGAAGACG GTGTGTGCAA CCGCTTCGGC CAGACGCATG AAGTGTCGAA CCTGTTCATT TCGGATGGCA GCCAGTTCAC CACCGGCGCG GCGGAAAATC CGACCCTGAC GATCGTCACA CTGGCGATTC GTCAGGCGGA TCACATCGCG GGGCAGATGA ATAAACGCGC GGTGTAA
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Protein sequence | MDQDNNKVRF SHNDDRVVVI IGSGAGGGTL ANELAQKGIN VVVLEAGKLH TQGDFTTDEW GAFQMLSWLD KRTTSGSWRI AKDFPNLPAW ICKTVGGTTT HWAGASLRIQ PYEFKAKTTY GDIKDANLLD WPVTREELDP YYDRASQKMG VTRTNGLPGL PGNNNFKVMS AGAMKVGYKD CNTGHMAINS VVRDDRAHCF QRGFCFQGCR TGAKWSTLYT ELPRAQATGH MELRTQAHVV RIETDARGKA KEVLYYDGNG KLQRQKARVV AVAGNSIETP RLLLNSHSSK FPQGLANGSG QVGRNYMRHT TGSVYAVFND KVEMFKGTTM AGIIEDEAVF NPQRGFAGGY HMETVSLGLP FYAAFLNPGA WGPTFSQAMD QYAYTAGMWI VGEDMPRESN RVTLNTDVKD QYGQPVANVH FDDHPNDEAM RDHAYKQGTA VYEAAGAKTV YRVPPYPSTH NLGTARMSAR AEDGVCNRFG QTHEVSNLFI SDGSQFTTGA AENPTLTIVT LAIRQADHIA GQMNKRAV
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