Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2708 |
Symbol | |
ID | 6283780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3060806 |
End bp | 3062917 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622269 |
Product | phospholipase C, phosphocholine-specific |
Protein accession | YP_001896327 |
Protein GI | 187924685 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAA AAAATCGCCG TGATTTTCTG CGCTCCGCCG CGCATGCAGC GGGTTCCGCC ACCGCGTTGA GCATGCTGCC GCTGGGCATT CGCAACGCAC TCGCCATTCC CGCCAACAAC AAGACCGGCA CCATTCGCGA TGTCGAGCAC ATTGTCGTGC TGATGCAGGA AAACCGTTCG TTCGACCACT ACTTCGGCAC GCTCAAGGGC GTGCGCGGTT TTGGCGACAC GCGCGCGATC AATCTGCCGA ACGGCAAGCC CGTGTGGTAT CAACCGCTCG CGGCGGATGC CGGTTACGTG CTGCCGTTCC GCCCGAGCGC GCCGAATCTG GGTCTGCAAT TCCTGCAGGA TCTCGCGCAC GACTGGACCA GCACGCACGC GGCTTGGAAC GGCGGCCGCT ACGATCAATG GGTGCCCGCC AAGAGCGCCA CGACAATGGC CTATTTCACG CGCGAGGACA TTCCGTTTCA CTACCAACTC GCCGATGCGT TCACCATCTG CGACGCGTAC CACTGCTCGC TGATGGGACC GACGGACCCG AACCGCTATT ACATGTGGAG CGGCTGGGTC GGCAACGACG GCAGCGGCGG CGGCCCAGTG ATCGACAACT CCGAACTCGG CTACGGGTGG TCCACTTACC CCGAAGTGCT GCAGAACGCG GGCATTTCGT GGAAGATCTA CCAGGACATC GGCACCGGTC TCGACGCCAA CGGTTCGTGG GGCTGGACGC AAAACCCGTA CATCGGCAAC TACGGCGACA ACTCGCTGCT CTACTTCAAC CAGTACCGCA ACGCGCAGCC CGGCAATCCG CTTTACGACA ACGCGCGCAC CGGCACGAAC GCGGCGAAAG GCGACGGCTA CTTTGACATC CTTAAACGCG ACGTGCAGAA CAACGCGTTG CCGCAAGTGT CGTGGATCGT CGCGCCCGAA GCCTACTCCG AACATCCGAA CTGGCCGACC AACTACGGCG CGTGGTACAT CGACCAGGTC CTGCAGATTC TCACGTCGAA TCCCGAGGTG TGGAGCAAGA CGGTGCTGCT GATCAACTAC GACGAGAACG ACGGTTTCTT CGATCACATG GTGCCGCCGT TCGCACCGTC GTCGAGCGCG AACGGTCTGT CCACCGTCGA CACAAGCAAC GAAATCTATC CGGGCGATGC GAAGATTCCC GCCGCCCCGT ACGGACTCGG ACCGCGCGTG CCGATGCTGG TCGTGTCGCC GTGGTCGAAA GGCGGCTATG TGTGCTCGGA ACTGTTCGAC CACACGTCGG TGATCCGCTT CATCGAAAAG CGTTTCGGAC ACGAGCACAA CCTCGGCGAA TCGAACATCA CGCCGTGGCG CCGCGCGGTG TGCGGCGATC TGATGTCGGC GTTCAACTTC CGCAATCCGA ACGACGCTTT CCCGACGCTG CCGGGCACGA GCGGCTACGT GCCGCCGGAT CAGAACCGCC ATCCGGATTA CGTGCCGCTG CCGCCCGCCT TGCAGGCCGT GCCAAAGCAG GAACCCGGCG TGCGCCCCGC TCGCGCGTTG CCCTACGAGT TGTTCGTGCG TGTGCATGGC GAAGGTTCGG CCAACCAGCT TACGATGCGC TTCGTCAACA CGGGCCGCAC TGGCGCAGTG TTTCTCGTCT ATGCCGCGCA TAGTCTCGAC GCGCCGCGCA CCTACACGGT CGAAGCCGGC AAGCGCCTGC AGGACGCGTT GCCGCTGAAT GCCGACGGCA GCTACGACTT CACTGTGTAC GGCCCGAATG GCTTTCTGCG CCGCTTCGCG GGCAAGCCGG TCGCGCGCAA CTGGTGGAAC GGTTCCGACA TCGCGCGGCC TGAAGTCGAG GAAGGCTACG ACGTCGCGAA CGGCAATCTG CAGTTGCGCC TTGAAAACGT GGGCAGCGCG CCTTCCCAAT TCAAGATCGT CAACGCGTAC GACCCGAACA ACGTGATCCG GCATACGGTG CGCGGCGGCG ACACTGACCA GATCTACCTC GATCTGCGCA ATGCTCACGG CTGGTACGAC CTGGCGATTA CGGTCAATAC GGATCCGCTG TTCGCGCGGC GTTTTGCCGG ACACGTGGAG ACCGGCAAGA GCAGCATGAG CGATCCGGCG CTGGGGAGCT AA
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Protein sequence | MTSKNRRDFL RSAAHAAGSA TALSMLPLGI RNALAIPANN KTGTIRDVEH IVVLMQENRS FDHYFGTLKG VRGFGDTRAI NLPNGKPVWY QPLAADAGYV LPFRPSAPNL GLQFLQDLAH DWTSTHAAWN GGRYDQWVPA KSATTMAYFT REDIPFHYQL ADAFTICDAY HCSLMGPTDP NRYYMWSGWV GNDGSGGGPV IDNSELGYGW STYPEVLQNA GISWKIYQDI GTGLDANGSW GWTQNPYIGN YGDNSLLYFN QYRNAQPGNP LYDNARTGTN AAKGDGYFDI LKRDVQNNAL PQVSWIVAPE AYSEHPNWPT NYGAWYIDQV LQILTSNPEV WSKTVLLINY DENDGFFDHM VPPFAPSSSA NGLSTVDTSN EIYPGDAKIP AAPYGLGPRV PMLVVSPWSK GGYVCSELFD HTSVIRFIEK RFGHEHNLGE SNITPWRRAV CGDLMSAFNF RNPNDAFPTL PGTSGYVPPD QNRHPDYVPL PPALQAVPKQ EPGVRPARAL PYELFVRVHG EGSANQLTMR FVNTGRTGAV FLVYAAHSLD APRTYTVEAG KRLQDALPLN ADGSYDFTVY GPNGFLRRFA GKPVARNWWN GSDIARPEVE EGYDVANGNL QLRLENVGSA PSQFKIVNAY DPNNVIRHTV RGGDTDQIYL DLRNAHGWYD LAITVNTDPL FARRFAGHVE TGKSSMSDPA LGS
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