| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2689 |
|---|
| Symbol | |
|---|
| ID | 6283690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3038812 |
|---|
| End bp | 3040146 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642622250 |
|---|
| Product | dihydropyrimidine dehydrogenase |
|---|
| Protein accession | YP_001896308 |
|---|
| Protein GI | 187924666 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC TGCGCTGTAC GATTGCCGGC ATCACTTCGC CGAATCCTTT CTGGCTCGCC
TCCGCGCCGC CGACCGACAA AGCCTATAAC GTGAACCGCG CCTTCGAAGC AGGCTGGGGC
GGCGTGGTGT GGAAAACGCT CGGCCTCGAC CCGCACGTGG TGAACGTCAG CTCGCGCTAC
GGCGCAGTGC AATGGAACGG CCAGCGCATG GCGGGCCTGA ACAACATCGA GCTGATCACG
GACCGCCCGC TCGACGTCAA CCTGAAGGAG ATCACGCAAG TCAAACGCGA CTGGCCGGAC
CGCGCGATGA TCGTCTCGCT GATGGTGCCG TGCAACGAAC GCGACTGGAA GTGGATTCTG
CCGCTCGTCG AAGACACCGG CGCGGATGCG GTCGAACTGA ATTTCGGCTG CCCGCACGGC
ATGAGCGAGC GCGGCATGGG CGCGGCCGTC GGGCAGGTGC CTGAGTATGT CGAGATGGTC
ACGCGCTGGG TGAAGGAAGG CACCAGGCTG CCGTGCCTCG TCAAACTCAC GCCGAACATC
AGCGACATTC GAACGGGTTC GCGCGCGGCC TATAAAGGCG GCGCGGACGG CGTGTCGCTG
ATCAACACGA TCAACTCGAT CGTCGCCGTC GATCTCGACG CGATGTCGCC GTTGCCGATG
GTCGATGGCA AGGGCACGCA CGGCGGCTAT TGCGGCCCGG CCGTGAAGCC GATCGCGCTG
AATATGGTCG CGGAAATCGC GCGCGATGTG GAAACGCCGA ATCTGCCGAT CTCCGGCATC
GGCGGGATTA CGACATGGCG CGACGCGGCC GAATTCATGG TGCTCGGCGC GGGCAGCGTG
CAGGTCTGCA CCGCGGCGAT GCACTACGGA TTCCGTATCG TTTCCGACTT GACCGACGGC
CTCTCCAACT GGATGGACGA AAAAGGCTAC GCGACACTCG ACGATATTCG CGGCCGCGCC
GTCCAGAACG TTACCGACTG GAAGTACCTG AACCTGAAAT ACGACATCAA GGCGCGCATC
GACCAGGACA AGTGCATCCA GTGCGGTCTG TGTCATATCG CCTGCGAAGA CACGGCTCAC
CAGGCCATCA TGAAAGAAAA AGATGGCGTC CGGCATTTTG AAGTGATGGA CTCCGAATGT
GTCGGCTGCA ATCTGTGCAT GCACGTGTGT CCGGTCGAGC AGTGCATCTC GATGGAGCGC
GTCGACAACG GCGAATACGC GAACTGGACC ACGCATCCGA ACAATCCGGC GCGCGTGGAC
GCAGGCGTGA GCGCATCGGC GGACACGGCT GAAACCGCCG AGCACGCGCA CGCGCACGCG
GCAAAAGCCG CCTGA
|
|---|
| Protein sequence | MADLRCTIAG ITSPNPFWLA SAPPTDKAYN VNRAFEAGWG GVVWKTLGLD PHVVNVSSRY
GAVQWNGQRM AGLNNIELIT DRPLDVNLKE ITQVKRDWPD RAMIVSLMVP CNERDWKWIL
PLVEDTGADA VELNFGCPHG MSERGMGAAV GQVPEYVEMV TRWVKEGTRL PCLVKLTPNI
SDIRTGSRAA YKGGADGVSL INTINSIVAV DLDAMSPLPM VDGKGTHGGY CGPAVKPIAL
NMVAEIARDV ETPNLPISGI GGITTWRDAA EFMVLGAGSV QVCTAAMHYG FRIVSDLTDG
LSNWMDEKGY ATLDDIRGRA VQNVTDWKYL NLKYDIKARI DQDKCIQCGL CHIACEDTAH
QAIMKEKDGV RHFEVMDSEC VGCNLCMHVC PVEQCISMER VDNGEYANWT THPNNPARVD
AGVSASADTA ETAEHAHAHA AKAA
|
|---|
| |