| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2683 |
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| Symbol | |
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| ID | 6283516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3031194 |
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| End bp | 3032912 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622244 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001896302 |
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| Protein GI | 187924660 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGA ACCCCGCTAC CAAGTATCGC TCGTTCAAGC CCGTCACCTT GACGGATCGC
CAGTGGCCGT CGCGCACCAT CACGCACCCG CCGATCTGGA TGAGCACCGA CCTGCGCGAC
GGAAATCAGT CGCTGTTCGA GCCGATGGAC GCGCAGCGCA AGATGCGCAT GTTCAAGACG
CTGGTGCAGA TCGGCTTCAA GGAAATCGAA GTCGCGTTTC CGTCCGCTTC GCAGACCGAC
TTCAATTTCG TGCGTGAACT GATCGAAGGC GGCCACATCC CCGACGACGT CACCATCGAA
GTCTTGACGC AAGCGCGCGA CGACCTGATC GAGCGCACCT TCGAATCCTT GCGTGGCGTG
CCGCGCGCCA TCGTCCACCT GTACAACGCG ACCGCGCCGG AATTCCGCAA GATCGTCTTC
AATCTGGAAA AGAGCGGCGT GAAGGAGTTG GCGCAAAACG CAGCGCGCAC GATGAAACGC
ATCGCCGCCA CCATGCCGGA AACGCAGTTC ACGTTCCAGT ACAGCCCGGA AGTATTCAGC
GGCACCGAAA TCGAATTCGC CAAAGAAGTC TGCGACGCCG TGTTCGACGT CTGGCAACCG
ACGCCGGAAC ACAAAGCCAT CGTCAATCTG CCGGCCACCG TCGAAATGTC CACGCCGAAC
ATCTACGCGG ACCAGATCGA GTGGATGCAC CGCAACCTCG CGCGCCGCGA TTCGCTGATC
ATCTCCGTGC ATCCGCATAA CGATCGCGGC ACCGCCGTGG CGGCGGCAGA ACTCGCCGTG
ATGGCCGGCG CGGATCGTAT CGAAGGCTGT TTGTTCGGCA ACGGCGAGCG CACCGGCAAC
GTGGACCTCG TCACGCTCGC GTTGAACCTG TACACGCAAG GCGTCGATCC GGGCCTCGAC
TTCTCGAACA TCAACGAAGT CGCGCGTACC GCTGAAGAAT GCACGCAACT GCCGATCCAT
CCGCGTCATC CGTATGTCGG CGATCTGGTG TTCACGGCCT TCTCGGGCTC GCATCAGGAC
GCGATCAAGA AGGGCTTCGC GGTGCAGAAA CCGGACGCGG TCTGGGAAGT GCCCTACATG
CCGATCGATC CGGCCGATCT CGGCCGCACC TACGACTCGG TGATTCGCGT GAACAGCCAG
TCGGGCAAGG GCGGCATCGC GTATCTGCTC GAACAGGGCT ACGGCGTCGT GTTGCCGCGC
CGCTTGCAAG TGGACTTCAG CTCGGCCGTG CAGCGCTTCA CCGACGACAG CGGCCAGGAA
GTCACGTCCG CGCAGATCTG GGAATTGTTC CAGCAGGAAT ATGTGCAGAA CACGGCGCCG
ATTCATTATG TGGGCCACAG CCTGTCCGAG CGCGAAGGAC GCGAGCGCAT CAAACTGACG
GTCGACATCC ACGGCACGCG GCGTGTGTTG ACCGGCGAAG GCAATGGCCC GCTCGACGCG
TTGATGCACG CGATCGGCGT ACCGGTGCGG ATTCAGCACT ATGAAGAGCG TGCGTTGACG
CAGGGCGCGG ATGCCCGAGC GGTGGCCGTC GCTGAAATGG CCGGCGCCGA TGTGACCGGC
AGCGCGTTCG GCGTCGGCAT CGACGCCAAT CTGGTGACGG CGTCGATTCG CGCGGTGATC
AGCGGGGTGA ATCGCGCTTA TGCTCGAGTC AATGCGCAGG CGCAGGAGAA CTTCTTCGAC
GCTGCGATGA ACGATGCCGC GGAGAGCGTG GGCGTTTAA
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| Protein sequence | MLKNPATKYR SFKPVTLTDR QWPSRTITHP PIWMSTDLRD GNQSLFEPMD AQRKMRMFKT
LVQIGFKEIE VAFPSASQTD FNFVRELIEG GHIPDDVTIE VLTQARDDLI ERTFESLRGV
PRAIVHLYNA TAPEFRKIVF NLEKSGVKEL AQNAARTMKR IAATMPETQF TFQYSPEVFS
GTEIEFAKEV CDAVFDVWQP TPEHKAIVNL PATVEMSTPN IYADQIEWMH RNLARRDSLI
ISVHPHNDRG TAVAAAELAV MAGADRIEGC LFGNGERTGN VDLVTLALNL YTQGVDPGLD
FSNINEVART AEECTQLPIH PRHPYVGDLV FTAFSGSHQD AIKKGFAVQK PDAVWEVPYM
PIDPADLGRT YDSVIRVNSQ SGKGGIAYLL EQGYGVVLPR RLQVDFSSAV QRFTDDSGQE
VTSAQIWELF QQEYVQNTAP IHYVGHSLSE REGRERIKLT VDIHGTRRVL TGEGNGPLDA
LMHAIGVPVR IQHYEERALT QGADARAVAV AEMAGADVTG SAFGVGIDAN LVTASIRAVI
SGVNRAYARV NAQAQENFFD AAMNDAAESV GV
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