| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2670 |
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| Symbol | |
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| ID | 6281265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3015795 |
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| End bp | 3017726 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622231 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001896289 |
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| Protein GI | 187924647 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.381108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA ATCCGAAGTT CCTTTCCGCC GACGCCCACG TCGACGAAGC CGCTGTCGCG
CCGCTGCCGA ATTCCCGCAA GGTCTACGTG ACCGGCTCGC GTGCCGACAT CCGCGTGCCG
ATGCGCGAAA TCTCGCAGGC CGATACGCCC GACAGCTTCG GCGGCGAAAA AAATCCGCCG
GTCTATGTCT ACGACACGTC GGGCCCGTAC TCCGATCCGG AAGCGAAGAT CGACATCCGC
GCCGGCTTGC CCGCACTGCG CCAGGCCTGG ATCGAAGAGC GCGGCGACAC CGAAGCGCTG
ACGGGTCTGT CGAGCGACTT CAGCCGCGAG CGCGCCGCCG ACACGGCCAC CGCCGATCTG
CGCTTCAAGG GCTTGCATCG CACGCCGCGC CGCGCGATCG CCGGCAAGAA CGTCTCGCAG
ATGCACTACG CGCGGAAAGG CATCATCACG CCGGAAATGG AATACATCGC GATTCGCGAG
AACCAGCGCC GCGCCGAGTA TCTGGAAAGC CTGAAGACGA GCGGCCCGAA CGGCGAAAAG
CTCGCGGCGA TGATGGGCCG CCAGCACCCG GGCCAGGCGT TCGGCGCGAG CGCGTTCGGC
CCGAACGGCC TCACGGCGAT CACGCCGGAA TTCGTGCGCG AAGAAGTCGC GCGCGGCCGC
GCGATCATCC CGAACAACAT CAATCACCCG GAAAGCGAAC CGATGATCAT CGGCCGCAAC
TTCCTCGTGA AGGTGAATGC GAACATCGGC AACTCGGCGG TGACGTCCTC CATCGGCGAG
GAAGTCGACA AGATGACGTG GGCGATCCGC TGGGGCGGCG ATACGGTGAT GGATCTGTCG
ACCGGCAAGC ATATCCACGA AACGCGCGAG TGGATCATCC GCAATTCGCC GGTGCCGATC
GGCACGGTGC CGATTTACCA GGCGCTGGAA AAGGTCAACG GCAAGGCCGA AGACCTGACG
TGGGAAATCT TCCGCGACAC GCTGATCGAA CAGGCCGAGC AAGGCGTCGA TTACTTCACG
ATTCACGCGG GCGTGCGTCT GCAATACGTG CCGCTCACGG CCAAGCGCAT GACGGGCATC
GTCTCGCGCG GCGGCTCGAT CATGGCGAAG TGGTGCCTCG CGCATCACAA GGAAAGCTTC
CTGTACGAGC ACTTCGAAGA CATTTGCGAA ATCATGAAGG CGTATGACGT GGCCTTCTCG
CTCGGCGACG GCCTGCGTCC CGGCTCGATC TACGATGCCA ACGACGAAGC GCAGCTCGGC
GAACTGAAAA CGCTCGGCGA ACTCACGCAG ATCGCGTGGA AGCACGACGT GCAGACCATG
ATCGAAGGCC CCGGCCACGT GCCGATGCAG CTCATCAAGG AGAACATGGA CCTGCAACTC
GAATGGTGTG ACGAAGCGCC GTTCTACACG CTGGGACCGT TGACGACCGA CATCGCGCCG
GGCTACGACC ACATCACGTC GGGCATTGGC GCGGCGATGA TCGGCTGGTT CGGCACGGCC
ATGCTCTGCT ACGTCACCCC GAAGGAACAC CTCGGGCTGC CGAACAAGGA CGACGTCAAG
ACCGGCATCA TCACGTACAA GCTGGCCGCG CACGCCGCCG ATCTGGCGAA GGGCCATCCG
GGCGCGCAGG TGCGTGACAA CGCGCTCTCC AAGGCGCGCT TCGAATTCCG TTGGGAAGAC
CAGTTCAACC TCGGTCTCGA TCCGGACAAG GCGCGCGAAT TCCACGACGA AACGCTGCCA
AAGGATTCGG CCAAGGTCGC GCATTTCTGC TCGATGTGCG GCCCGCACTT CTGCTCGATG
AAGATCACGC AGGACGTGCG CGAGTTCGCC GCGCAACAAG GCGTGACCGA CGACGAAGCA
CTGAAGAAAG GCATGGAAGT GAAGTCGATC GAGTTCATGA AGAAAGGCGC TGAGATTTAC
CAGCGGCAGT AA
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| Protein sequence | MNANPKFLSA DAHVDEAAVA PLPNSRKVYV TGSRADIRVP MREISQADTP DSFGGEKNPP
VYVYDTSGPY SDPEAKIDIR AGLPALRQAW IEERGDTEAL TGLSSDFSRE RAADTATADL
RFKGLHRTPR RAIAGKNVSQ MHYARKGIIT PEMEYIAIRE NQRRAEYLES LKTSGPNGEK
LAAMMGRQHP GQAFGASAFG PNGLTAITPE FVREEVARGR AIIPNNINHP ESEPMIIGRN
FLVKVNANIG NSAVTSSIGE EVDKMTWAIR WGGDTVMDLS TGKHIHETRE WIIRNSPVPI
GTVPIYQALE KVNGKAEDLT WEIFRDTLIE QAEQGVDYFT IHAGVRLQYV PLTAKRMTGI
VSRGGSIMAK WCLAHHKESF LYEHFEDICE IMKAYDVAFS LGDGLRPGSI YDANDEAQLG
ELKTLGELTQ IAWKHDVQTM IEGPGHVPMQ LIKENMDLQL EWCDEAPFYT LGPLTTDIAP
GYDHITSGIG AAMIGWFGTA MLCYVTPKEH LGLPNKDDVK TGIITYKLAA HAADLAKGHP
GAQVRDNALS KARFEFRWED QFNLGLDPDK AREFHDETLP KDSAKVAHFC SMCGPHFCSM
KITQDVREFA AQQGVTDDEA LKKGMEVKSI EFMKKGAEIY QRQ
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