Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2586 |
Symbol | |
ID | 6283425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2919064 |
End bp | 2919870 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622145 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001896205 |
Protein GI | 187924563 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00119641 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGATA CGAACCCGGA TCCCAAAACT TCGATCCAGG TGATCGAACG CATGATGCGC TTGCTCGACG CACTCGCTGC GCACAGCGAC CCGGTCAGCC TGAAAGAACT CGCCATCCGC ACGGAGCTGC ATCCGTCCAC TGCGCACCGC ATCCTGAACG ATATGGTGAT GTGCCGGCTG GTCGACCGGT CGGATCCCGG CACTTACCGT CTCGGCATGC GCCTGCTCGA ACTGGGCAAT CTGGTGAAGG CGCGCCTGTC GGTGCGCGAC GCGGCGCTCA CGCCGATGCG CGAACTGCAT CGTCAGACGG GCCAGACCGT GAATCTGTCG GTGCGTCAGG GCGACGAAAT CGTCTATATC GAGCGCGCTT ATTCCGAGCG TTCCGGCATG CAGGTGGTGC GCGCCATCGG CGGACGGGCG CCCTTGCATC TGACCTCGGT AGGCAAGCTG TTCCTCGCCG CCGACGAATC CACCCGCGTG CGAGCCTACG CCACGCGCAC CGGTTTGTCG GGCCACACGC AGAACAGCAT TACCGACCTG ACCAAACTGG AGCGTGAGTT GTCGCATGTG CGCCAGCAGG CGTGCGCGCG AGACAACGAA GAACTGGAAC TCGGCGTGCG CTGCATCGCC GCCGGTATCT ACGACGACAC CGGCAAGCTG GTTGCAGGTT TGTCGCTGTC GGCGCCGGCG GATCGCTTGC AAGACTCCTG GATTGGCCAG CTGAGCCAGA CCGCGCTGAT GATCTCGGCG TCACTCGGCT ATCGACCGCA ACCCGCGCAG GACCATTCGC ATAGCCATCA CGCGTAA
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Protein sequence | MSDTNPDPKT SIQVIERMMR LLDALAAHSD PVSLKELAIR TELHPSTAHR ILNDMVMCRL VDRSDPGTYR LGMRLLELGN LVKARLSVRD AALTPMRELH RQTGQTVNLS VRQGDEIVYI ERAYSERSGM QVVRAIGGRA PLHLTSVGKL FLAADESTRV RAYATRTGLS GHTQNSITDL TKLERELSHV RQQACARDNE ELELGVRCIA AGIYDDTGKL VAGLSLSAPA DRLQDSWIGQ LSQTALMISA SLGYRPQPAQ DHSHSHHA
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