| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2565 |
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| Symbol | |
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| ID | 6284392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2898071 |
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| End bp | 2898859 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622124 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001896184 |
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| Protein GI | 187924542 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0486072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0819176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATCG ATACGCACTG TCATCTCGAC GCATCGGAAT TCGACGCCGA TCGCGCGGAA
GTCGCGGCGG CGGCGCGTCG CGCGGGCGTG GGGCGAATCG TGATTCCGGC GATCGGCCGG
CAGAATTTCG CGGCGGTGCG TGAGTTGGCA CACCAGATTG AGGGCGGTGC GTACGCGCTT
GGCATTCATC CGCTGTTCAC GCCTCGCGCG CAGGAAAGCG ATCTGGATCT GTTGCGCATG
GAAATCGAGG CGAGTCTCGA TGATCCGCTC TTTGTCGGCA TCGGCGAGAT AGGACTCGAT
TATTTCGTCG ACGGGCTCGA CGACGCGCGC CAGCAATTCT TCTACAACGG CCAGTTGCAG
CTCGCGCGTG AGTTCGATCT GCCGGTGATC TGCCACGTGC GCAAATCGCA AGATCAGGTC
ATCAAAGGAC TGCGGCGGCA TCAGATTCAT TGCGGCATCG CGCACGCGTT CAACGGCAGT
TTTCAGCAGG CTCAGGCGTA TATCGATCAG GGCATGCATC TCGGCTTCGG CGGCAATCTG
ACTTTCGAGC GCGCGCGGCA AATTCGCCGT CTCGCCGAGC AGTTGCCGTT CGACGCGCTG
GTCGTCGAAA CCGACGCGCC GGACATCGCG CCGTCGTGGA TCTACAAGCA GCGCAACACG
CCGGAGCAGA TTCCCGCAAT CGGCGCCGGC CTCGCGCAAC TGCGCGGCAT GGCCGCCGAC
GAAGCCGCCC TAGGCACAAC GGCTAACGCG CTCGCCGCGC TGCCGCGGCT GGCACTTTCC
TCTGCATAA
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| Protein sequence | MWIDTHCHLD ASEFDADRAE VAAAARRAGV GRIVIPAIGR QNFAAVRELA HQIEGGAYAL
GIHPLFTPRA QESDLDLLRM EIEASLDDPL FVGIGEIGLD YFVDGLDDAR QQFFYNGQLQ
LAREFDLPVI CHVRKSQDQV IKGLRRHQIH CGIAHAFNGS FQQAQAYIDQ GMHLGFGGNL
TFERARQIRR LAEQLPFDAL VVETDAPDIA PSWIYKQRNT PEQIPAIGAG LAQLRGMAAD
EAALGTTANA LAALPRLALS SA
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