| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2564 |
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| Symbol | |
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| ID | 6284391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2895170 |
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| End bp | 2897959 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642622123 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_001896183 |
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| Protein GI | 187924541 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0267783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0941772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCAT GGTGGTGTGG TTTTGCGTTG GGCGTGATCG GGCTGCAACG GCAGGCGGTG
TTGCCGGACT GGACGGCGTT GTGCGGGTTG GTGATGCTTG CTTGCGCCGC GGTCGTGGCG
GCGGTGTGGG GTTTGGGCGA GGGTAGTCGC GCGGCGGTCG GTGCGGATCA TGCGATGACC
CGCGTAACTA GCATTTCGGC TGAGGCCGGA ACTACGAATG CAGATAGAGC TCCGGCTATA
GCGGAGCTTG ACGCTGACAC TGAGGTTGGG ACCGTGCCGC GAGTTGGCGC CGCGACAAGG
TCAACGGTGG CGCCCGGCGA TTGGCAGCAC GCGTGTGCTA CGACCCTCGC TTCGCTCGTA
CTCCGCATCC GCTTCAGCCG GCGCGTGCGT TCCTTCCTGG GCTGGAGCGC CGTGTGGTGC
GCGGCCATGT GCGCGGGCTT TGGCTACGCA GCGATCCGTG CGGACATGCG TCTTGCGGTG
AGCTTGCCGA ACGCGTGGGA AGCGCGCGAT ATCGAGGTCG TCGGCAGTAT CAAAGGCTTG
CCGTCACACG ATGAAAATGG TGCGCGTTTT CTATTCGACG TCGAGTCTGC CGATGCGCCA
ATCGACGCTT TCCCTCGCGT CATCCAGCTC TCGTGGATCG CCGAAGATGC GCCGCCGCCT
TTGCTCGAGC CGGGCTCACG ATGGCGGCTG GCCGTGCGCC TCAAGCGTCC GCATGGCAAT
GCCAACTTCG GCGTGCGCGA TGCTGAGGCG ACTCTGCTCG CACGCAACGT GCGCGCCACC
GGTTATGTGA GCGCGCCGGT TCACGCTGTG CGATTGCCTG GTAGGGCGCG CGGCGTCGGC
GTGACGGTGG ACCGCTGGCG CGCCGCGCTG CGCGAACGGA TCGATGCAGT GCTCGCTGAC
GCGCCGCATC GCGGGATTGT CGTGGCGCTC GCGATCGGCG CGCAGGACGA AGTCAGCGCC
GCGGACTGGC TGTTGATGCG CGGCACGGGT ACGAGTCATC TGGTGGCGAT TTCGGGGCTG
CATATTGGCT TCGTCGCGGG CCTTGCGGGT TGGCTGGCCG GCGCGGTGTG GCGGCGCTCC
GGATGGTTCG GCCGCAACTG GCCGTTGCGG CTGCCGGCAC AAGTCGTCGC GGTGACGGGC
GGTGCGCTGT TCGCCGCGCT GCATGCCGCG TTGGCCGGGT TCAACGTGCC GGCGCAGCGT
GCGCTGTGGA TGGCCGGGGT CGTCGCGCTC GCGTTTATCA GCGGGCGCAA TGTGCCGCGC
TCGGCGGTGC TCGCGTGGGC CTTGGGGCTC GTGCTGGTGG TCGATCCGTG GGCGGTCGTG
TCGGCGGGCT TCTGGTTGTC GTTCTGCGCG GTGGCGGCGA TTCTGTACGC CATGTCGGGG
CGGCCGCATG TGCAAGATCA CGAACAGCAC CGCGACGAAA CAGCGGACGA CGGCGCTGCG
GCGAGCCGCT GGTCGAGACT GGTTATCGTT TTGCGCCGCC GCTTGCGCGA TGCCGGCGCG
AGGTTGCGCA GCGCCGCGCA GGTTCAGTTC GCCGTGACGA TCGCGCTTGC GCCGTTGACC
ATCTACTGGT TCGCGCAGAT TCCGCTGATC GGCCCGCTCG CGAATGCTTT CGCGATTCCG
TGGGTAAGCC TGCTGGTCAC GCCGGCGGTG CTGGCCGGCG TCGCGTTGCC GGCGCCGTTC
GACGCCTACG CATGGCATGG CGCACACGCT TTGCTGGACC TGCTGGCGGT GGGCTTGCAA
GCGCTATCCG GCCCCGCCTG GACGCTCTGG CGTCTGCCGC AACCGGATGC ATGGACGCTG
GCCGCGGCGG CAGTCGGCGT GCTTTGGTGT CTTGCGCCGC GCGGCTGGCC GCTGCGCTGG
GCCGCGCCGC TGACCTGGCT GCCGCTGCTG ATACCCGCGC CGTCCGGACC GCCGCACGGC
AGTTTCCGTT TGACCGCGCT GGACGTCGGT CAAGGCACCT CGGTGCTGGT CGAAACGACG
CATCACACGT TGCTGTTCGA TACCGGACCG GGACCGGAGT CGACTCACGC GGGCGAGCGG
GTGGTCGTGC CGTTTTTACA GGCGCGTGGC GTGACGGCGC TCGATACGTT GATCGTGAGC
CACGCCGACT CCGATCATTC GGGCGGCGCG CCCGCCGTGC TGGACGCGAT CGATGTGCAT
CAAATGGTGG CGGCATTGGC GCCGTCGAAT GCGCTGTGGT CGAATGCGCG GCAACGCGGC
GCCGACACGC TGCCTTGTGC GGCGGGTCAG CGCTGGCAGT GGGACGGCGT GGAGTTCGCA
ATGCTCTGGC CGGACGCCGG GCCGCTGCAA GGCAAGCCGA ATGCGCATTG CTGCGTGCTG
CGGGTCAGCA CTTTGCCGAC CGCCGCAAGC CCGTCGATCA GCCATACTCA TACAGAACCG
CCGCGCATGA CGGCCTTGCT CACGGCGGAC ATCGAGGCGC CCGTCGAACG CGTTCTGCTC
GCGCGCGATC GCGAGGCGTT GCGCGCACAA GTGCTGGTCG TGCCGCATCA CGGCAGCAAG
ACTTCGTCGA CCGAGCCGTT CCTCGACTCT ATCGATCCGC TCATCGCGCT ATTTCAGGTA
GGCTATCGCA ACCGTTTTCA TCATCCGAAT GCGGGTGTGT TCGAGCGCTA CAAGGCGCGA
CGGATCGAGC TCGGGCGCAG CGACGTGGAC GGTGCGGTGC GCGTCGAGGT GAACCCGGGC
GGCGAGATAA GCGACGCCAC CCGCAGCAGC GCCACGGTCA CGCTCGAGCG CTATCGCGAC
ACGCAGCGCC GCTACTGGAT GGATCGCTGA
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| Protein sequence | MRAWWCGFAL GVIGLQRQAV LPDWTALCGL VMLACAAVVA AVWGLGEGSR AAVGADHAMT
RVTSISAEAG TTNADRAPAI AELDADTEVG TVPRVGAATR STVAPGDWQH ACATTLASLV
LRIRFSRRVR SFLGWSAVWC AAMCAGFGYA AIRADMRLAV SLPNAWEARD IEVVGSIKGL
PSHDENGARF LFDVESADAP IDAFPRVIQL SWIAEDAPPP LLEPGSRWRL AVRLKRPHGN
ANFGVRDAEA TLLARNVRAT GYVSAPVHAV RLPGRARGVG VTVDRWRAAL RERIDAVLAD
APHRGIVVAL AIGAQDEVSA ADWLLMRGTG TSHLVAISGL HIGFVAGLAG WLAGAVWRRS
GWFGRNWPLR LPAQVVAVTG GALFAALHAA LAGFNVPAQR ALWMAGVVAL AFISGRNVPR
SAVLAWALGL VLVVDPWAVV SAGFWLSFCA VAAILYAMSG RPHVQDHEQH RDETADDGAA
ASRWSRLVIV LRRRLRDAGA RLRSAAQVQF AVTIALAPLT IYWFAQIPLI GPLANAFAIP
WVSLLVTPAV LAGVALPAPF DAYAWHGAHA LLDLLAVGLQ ALSGPAWTLW RLPQPDAWTL
AAAAVGVLWC LAPRGWPLRW AAPLTWLPLL IPAPSGPPHG SFRLTALDVG QGTSVLVETT
HHTLLFDTGP GPESTHAGER VVVPFLQARG VTALDTLIVS HADSDHSGGA PAVLDAIDVH
QMVAALAPSN ALWSNARQRG ADTLPCAAGQ RWQWDGVEFA MLWPDAGPLQ GKPNAHCCVL
RVSTLPTAAS PSISHTHTEP PRMTALLTAD IEAPVERVLL ARDREALRAQ VLVVPHHGSK
TSSTEPFLDS IDPLIALFQV GYRNRFHHPN AGVFERYKAR RIELGRSDVD GAVRVEVNPG
GEISDATRSS ATVTLERYRD TQRRYWMDR
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