| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2549 |
|---|
| Symbol | |
|---|
| ID | 6281239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2880233 |
|---|
| End bp | 2880835 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642622108 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001896168 |
|---|
| Protein GI | 187924526 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG0500] SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00276386 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0974233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACTC CCGCTAGCTG TGCCGTGCAT GGATTGGGCG AACCGTCGCC GTGGGTGCGC
GAATGGGCGC ATCTGGTCGC GAAGGGCGGT GCCGTGCTCG ATGTCGCGTC CGGCGCGGGA
AGGCATGCGC GTTTCTTCGC GTCGCTGGGG CATCCCGTCA CCGCCATCGA CCGCGACGCG
GCGGCGCTCG ACGCGCTGCG CGGTGAGCCG CTAGTTACCA CGCTCCAGGC CGACATCGAA
GGCGCCGCGT GGCCTCTGCC GGCCGACGCG AAATTCGCCG CCGTCGTAGT AACGAACTAT
CTGCACCGGC CGCTCTTTCC GCAGCTTTTG CACGCGCTCG CGCCCGGCGG CGTACTGGTT
TACGAGACCT TCGCGCAAGG AAACGAAAGC GTCGGCAAAC CCTCTAATCC GGCGTTTCTG
CTGGCGCCCG GCGAGCTTCT CGACCGCGTG CGCGGCCAGC TCCGGGTGGT CGCTTTTCAG
GACGGTTTTC TCGCGCAGCC ACGCCCGGCC TACGTCCAGC GGATCTGCGC GATTCTGGAG
GCGGAGCGCT CAGACGACCC CGCGCAGGCG GCATCTCCGC CTTGTTACGA GTTGGCTGGC
TAA
|
|---|
| Protein sequence | MSTPASCAVH GLGEPSPWVR EWAHLVAKGG AVLDVASGAG RHARFFASLG HPVTAIDRDA
AALDALRGEP LVTTLQADIE GAAWPLPADA KFAAVVVTNY LHRPLFPQLL HALAPGGVLV
YETFAQGNES VGKPSNPAFL LAPGELLDRV RGQLRVVAFQ DGFLAQPRPA YVQRICAILE
AERSDDPAQA ASPPCYELAG
|
|---|
| |