| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2520 |
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| Symbol | |
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| ID | 6282032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2843553 |
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| End bp | 2846237 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622079 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001896139 |
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| Protein GI | 187924497 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00821283 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000391787 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCATTC AAACCGCAGC GGCCAACGAC GTCGCACAGC ACACGCCGAT GATGCAGCAG
TATCTGCGCA TTAAAGCGGA CCATCCGGGC ACGCTGGTGT TCTATCGGAT GGGCGACTTC
TACGAACTCT TTTTCGAAGA CGCGGAAAAA GCCGCACGTC TGCTCGATCT GACACTCACG
CAGCGGGGCG CGTCGGCGGG CAATCCGATC AAGATGGCCG GCGTGCCGCA TCACGCGGTC
GAACAGTATC TCGCCAAGCT CGTGAAGCTC GGCGAATCCG TCGCAATCTG CGAGCAGATC
GGCGACCCGG CTACGTCGAA GGGCCCGGTC GAGCGCAAGG TGGTGCGCGT GGTCACGCCG
GGCACGCTCA CGGACGCAGC GCTCCTGTCC GACAAGAGCG ATGTCTATCT GCTGGCCATG
TGCGTCGCGC ATAACCGGCG CGGCGTGGCG ACCAGCGTCG GCCTTGCATG GCTGAATCTG
GCGAGCGGCG CGCTGCGCCT CGCGGAGGTC GCGCCCGACC AGGTGGCGGC TGCGCTTGAG
CGCATTCGTC CTGCGGAAAT TCTGGTTGCC GACACGCCTA GCGACTCGGC GAGCTGGACG
CCGCCGGTCA ATGCGGGCGC GCTCACCCGC GTGCCGGTCT GGCACTTCGA CGTCACCTCG
GGCACGCAAC GCTTGTGCGA TCAGCTGGAA GTGGCGGGCC TCGACGGCTT CGGCGCGCAT
TCGCTGACCT GCGCATGCGG CGCGGCCGGC GCGCTGCTGC TGTATGCCGC GGCCACACAA
GGTCAGCAGT TGCGTCATGT GCGCAGCCTG AAGGTCGAAT ACGAATCCGA ATATATCGGC
CTCGACCCCG CCACGCGCCG CAACCTCGAA CTCACGGAAA CACTGCGCGG CACTGAATCG
CCCACGCTGT GTTCCCTGCT CGACACCTGC TGCACGACCA TGGGCAGCCG GCTGCTGCGT
CACTGGCTGC ATCATCCGCC GCGCGAATCG GCGGTGGCGC AGGCGCGTCA GCAGGCGATC
GGCGCCTTGC TCGACGCGCC GCCGGGCGCG AGCATCGATT CGTTGCGCGG CGCGTTGCGG
CAGATCTCGG ACATCGAGCG CATCACCGGG CGTCTTGCGC TGCTGTCCGC GCGGCCTCGC
GATCTGTCGA GCCTGCGCGA TACCTTCATT GCATTGCCCG AGTTGCGCAC GCAAGTCGCA
GCCGTTGCGC CGAATGCGGA TTCGCTGGCC CGCATCGACG CATCCCTTGA ACCGCCGCAA
GCCTGCGTCG AACTGCTCAA GCGCGCGGTT GCGCAGGAAC CGTCGGCCAT GGTGCGCGAC
GGCGGCGTGA TCGCGCGCGG CTACGATGCG GAACTGGACG AACTGCGCGA TATTTCGGAG
AACTGCGGGC AGTTCCTGAT CGACCTCGAG ACACGCGAGC GCGCACGCAC GGGCATCGGC
AATCTGCGCG TCGAATACAA CAAGGTGCAT GGCTTTTATA TCGAAGTCAC GCGCGGCCAG
ACCGACAAGG TGCCCGACGA CTATCGCCGC CGGCAGACAC TGAAAAATGC CGAACGCTAC
ATCACGCCGG AACTGAAAAC GTTCGAGGAC AAAGCCCTGT CCGCGCAGGA ACGCGCCCTC
GCCCGCGAAC GCTCGCTCTA CGACGCGCTG CTGCAGGCGC TGCTGCCCTT CATCCCGGAT
TGTCAGCGGG TCGCCTCGGC GCTCGCCGAA CTCGATCTAC TGGCGGCCTT CGGCGAGCGC
GCCCGCGCGC TCGATTGGGT CGCGCCCACG TTTTCGGCAA ATGCCGGCAT CGAAATCGAA
CAGGGGCGGC ATCCGGTTGT CGAGGCGCAG GTCGAGCAGT TCATCGCCAA CGACTGCTCG
CTCACGCCCG AACGCAAACT GCTGCTGATC ACCGGCCCGA ACATGGGCGG TAAATCGACC
TTCATGCGCC AGACCGCGCT GATCGCGCTG CTCGCTTATG TGGGCAGTTA TGTGCCCGCG
CGACGCGCCG CCTTCGGGCC GATCGACCGC ATCTTCACGC GCATCGGCGC AGCGGACGAT
CTCGCCGGCG GCCGCTCGAC CTTCATGGTC GAGATGACCG AAGCCGCCGC GATCCTGAAC
GACGCCACGC CGCAAAGTCT CGTGCTGATG GACGAGATCG GCCGCGGCAC GTCCACGTTC
GACGGGCTCG CGCTGGCGTG GGCCATCGCG CGGCATCTGC TCGCGCACAA CGGTTGCCAT
ACGCTATTTG CCACGCACTA CTTCGAATTG ACGCAGTTGC CCGCGGAATT TCCACAGGCG
GCCAACGTGC ATTTGTCGGC GGTCGAGCAT GGGCACGGCA TCGTGTTCCT GCACGCGGTC
AGCGAAGGCC CGGCGAATCA GAGCTACGGC CTGCAGGTTG CGCAACTCGC CGGCGTGCCG
AACGCGGTGA TTCGCGCGGC GCGCAAGCAT CTTGCGCATC TGGAACAGCA GTCGGCCGCG
CAACCCGCGC CGCAACTCGA TCTGTTCGCC ACGCCCATGC CGATGCTGCT CGAAGACGCA
GACGACGAGC GCGATGCGAA GGCAGAGCCC GCGGTGCCAC CTGCCATGCA GGAGCTCGTC
GAGCGTCTGC GCGGCATCGA TCCGAACGAT CTGCGACCGC GCGAAGCACT CGATCTGCTG
TACGAATTGC ACGAACTGGC CGCCGCGCCG GATGCGGATC ATTGA
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| Protein sequence | MGIQTAAAND VAQHTPMMQQ YLRIKADHPG TLVFYRMGDF YELFFEDAEK AARLLDLTLT
QRGASAGNPI KMAGVPHHAV EQYLAKLVKL GESVAICEQI GDPATSKGPV ERKVVRVVTP
GTLTDAALLS DKSDVYLLAM CVAHNRRGVA TSVGLAWLNL ASGALRLAEV APDQVAAALE
RIRPAEILVA DTPSDSASWT PPVNAGALTR VPVWHFDVTS GTQRLCDQLE VAGLDGFGAH
SLTCACGAAG ALLLYAAATQ GQQLRHVRSL KVEYESEYIG LDPATRRNLE LTETLRGTES
PTLCSLLDTC CTTMGSRLLR HWLHHPPRES AVAQARQQAI GALLDAPPGA SIDSLRGALR
QISDIERITG RLALLSARPR DLSSLRDTFI ALPELRTQVA AVAPNADSLA RIDASLEPPQ
ACVELLKRAV AQEPSAMVRD GGVIARGYDA ELDELRDISE NCGQFLIDLE TRERARTGIG
NLRVEYNKVH GFYIEVTRGQ TDKVPDDYRR RQTLKNAERY ITPELKTFED KALSAQERAL
ARERSLYDAL LQALLPFIPD CQRVASALAE LDLLAAFGER ARALDWVAPT FSANAGIEIE
QGRHPVVEAQ VEQFIANDCS LTPERKLLLI TGPNMGGKST FMRQTALIAL LAYVGSYVPA
RRAAFGPIDR IFTRIGAADD LAGGRSTFMV EMTEAAAILN DATPQSLVLM DEIGRGTSTF
DGLALAWAIA RHLLAHNGCH TLFATHYFEL TQLPAEFPQA ANVHLSAVEH GHGIVFLHAV
SEGPANQSYG LQVAQLAGVP NAVIRAARKH LAHLEQQSAA QPAPQLDLFA TPMPMLLEDA
DDERDAKAEP AVPPAMQELV ERLRGIDPND LRPREALDLL YELHELAAAP DADH
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