Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2472 |
Symbol | |
ID | 6284534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2789370 |
End bp | 2789849 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642622026 |
Product | Glutathione peroxidase |
Protein accession | YP_001896092 |
Protein GI | 187924450 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.161656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000149935 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACATCGA TTTATTCGTT TTCGGCACAC ACGTTGGCCG GCGAGGAAGT CAGCCTTGGG CAGTATGAAG GCAAGGTTCT GCTGATCGTC AACACGGCGA GCGAATGCGG GTTCACGCCG CAGTACGCGG GCTTGCAGAA GCTGTACGAC ACCTACGCCG CACGCGGGCT GACGGTGCTC GGGTTTCCCT GCAACCAGTT CGGCAAACAG GAGCCGGGCG ACGCCGCGCA GATCGGCAGC TTCTGCGAAA AGAACTACGG CGTGACGTTC CCGATGTTCG ACAAAGTGGA CGTCAACGGT GCGAACGCGC ATCCGCTGTT CCGCTATCTG ACGGGCGAGG CGCCCGGTCT GCTCGGCCTG GAAGCGATCA AGTGGAACTT CACCAAGTTC CTGATCGGCC GCGACGGCAA CGTGGTGAAG CGCTATGCGC CGCTGACGAA GCCCGAGGCG ATCACCGAGG ACATCGAAAA ACTGCTTTAA
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Protein sequence | MTSIYSFSAH TLAGEEVSLG QYEGKVLLIV NTASECGFTP QYAGLQKLYD TYAARGLTVL GFPCNQFGKQ EPGDAAQIGS FCEKNYGVTF PMFDKVDVNG ANAHPLFRYL TGEAPGLLGL EAIKWNFTKF LIGRDGNVVK RYAPLTKPEA ITEDIEKLL
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