Gene Bphyt_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2472 
Symbol 
ID6284534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2789370 
End bp2789849 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID642622026 
ProductGlutathione peroxidase 
Protein accessionYP_001896092 
Protein GI187924450 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.161656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000149935 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACATCGA TTTATTCGTT TTCGGCACAC ACGTTGGCCG GCGAGGAAGT CAGCCTTGGG 
CAGTATGAAG GCAAGGTTCT GCTGATCGTC AACACGGCGA GCGAATGCGG GTTCACGCCG
CAGTACGCGG GCTTGCAGAA GCTGTACGAC ACCTACGCCG CACGCGGGCT GACGGTGCTC
GGGTTTCCCT GCAACCAGTT CGGCAAACAG GAGCCGGGCG ACGCCGCGCA GATCGGCAGC
TTCTGCGAAA AGAACTACGG CGTGACGTTC CCGATGTTCG ACAAAGTGGA CGTCAACGGT
GCGAACGCGC ATCCGCTGTT CCGCTATCTG ACGGGCGAGG CGCCCGGTCT GCTCGGCCTG
GAAGCGATCA AGTGGAACTT CACCAAGTTC CTGATCGGCC GCGACGGCAA CGTGGTGAAG
CGCTATGCGC CGCTGACGAA GCCCGAGGCG ATCACCGAGG ACATCGAAAA ACTGCTTTAA
 
Protein sequence
MTSIYSFSAH TLAGEEVSLG QYEGKVLLIV NTASECGFTP QYAGLQKLYD TYAARGLTVL 
GFPCNQFGKQ EPGDAAQIGS FCEKNYGVTF PMFDKVDVNG ANAHPLFRYL TGEAPGLLGL
EAIKWNFTKF LIGRDGNVVK RYAPLTKPEA ITEDIEKLL