| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2447 |
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| Symbol | |
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| ID | 6282078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2756846 |
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| End bp | 2759158 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642622001 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_001896067 |
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| Protein GI | 187924425 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00286506 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTTTAAAC CTCATCGCTT TGTTCCAAAG ACGGTTATAG CCGCGGCATT CGCCGCGCAT
GGGCTGGTTG CTCACGCAAC GACGCCCTTC GTGGTGCAAG ACATCCGGAT CGAGGGATTG
CAACGCGTCG AACCTGGTAC CGTGTTCGCC TATCTGCCCA TCAAGCAAGG CGACACCTTC
AGCGACGACA AGGCATCGGA GGCCATTCGC GCCCTGTATG CCACGGGCTT CTTCAACGAC
GTCAAGATCG CGACCGAAGG CAACGTCGTC ATCGTGCAGG TGCTGGAACG TCCGGCCATC
GGCACGATCG ACTTCGCCGG CATTCATGAG TTCGACAAGG AAAACCTGAC CAAGGCGCTG
CGCGCCGTGG GTTTGTCGCA AGGCCGTTAT TACGACAAGG CGCTGGTCGA CAAGGCCGAG
CAGGAACTGA AGCGCCAGTA CCTGACGCGC GGCTACTACG CCGCTGAAGT CACCACCACG
ATCACGCCGA TCGACCGCAA TCGCGTGTCG GTGCTGTTCG CGGTGGCTGA AGGTCCGAGC
GCGAAGATCC GCCAGATCAA CTTCATCGGC AACAAGGCGT TCAGCACGGG TACGCTGCGC
GACGAAATGC AGTTGTCCAC GCCGAACTGG TTCTCGTGGT ACACGAAGAA TGACCTGTAC
GCGAAAGACA AGCTGACCGG CGACCTCGAG AACGTTCGCT CTTACTACCT GAATCGCGGC
TATCTCGAGT TCAACATCGA GTCGACCCAG GTGTCGATCA CGCCGGACAA GAAGGACATG
TATCTGACGG TCACGCTGCA TGAAGGCGAG CCGTACACGA TTTCGAATAT CAAGCTGGCG
GGCAATCTGC TCGACCGCGA GCCGGAGCTG GCCAAGCTCA TCAAGATCAA ACCGGGCGAC
CGCTTCTCGG CTGAAAAGCT GCAGGCCACC ACCAAGGCTA TCGTCGACAA GCTGGGCGAA
TACGGCTATG CGTTCGCCAC GGTCAACGCG CAGCCGCAGA TCGATCAGGC CAACCATAAG
GTCGACCTGA CGCTGCAGGT GGACCCGAGC CGCCGCGTCT ACGTGCGCCG CATCAACGTG
GTCGGCAATA CGCGTACGCG TGACGAAGTG GTACGCCGCG AAATGCGCCA GCTCGAAAGC
TCGTGGTTCG ATTCGAATCG CCTCGCGCTG TCGAAAGACC GGATCAACCG TCTCGGCTAC
TTTACTGATG TCGACGTGAC CACGGTGCCC GTGGAAGGCA CGCCGGACCA GGTCGATGTG
GATGTGAAGG TGGCCGAAAA GCCGACCGGC GCGATCACGC TGGGTGCGGG CTTCTCGTCG
ACGGACAAGG TGGTGCTCTC GGCCGGCGTG TCGCAAGACA ACGTGTTCGG CTCCGGCACG
AGTCTCTCGG TGAACGTGAA TACCGCCAAG ACGTACCGTA CGTTGACGGT CACGCAGGTC
GACCCGTACT TCACGGTCGA CGGCATCAAG CGTATTACCG ACGTCTACTA CCGCACGTAC
CAGCCGCTGT ACTACTCGAC GGACTCGAGC TTCAAGATCG TTACGATCGG TGGCGATCTG
AAATTCGGTA TTCCGTTTTC GGAAGTCGAC ACGGTGTACT TCGGTGCCGG CCTCGAGCAG
AACCAGCTGG ATGTCGACGC GAATACGCCG GCGTCCTACC GGCAGTACGT GCAGGATTTC
GGCCGCGTGT CGAACAACGT GCCGATCACC GTCGGCTGGT CGCGCGACGC GCGTGACAGC
GCGCTGGTGC CGAGCCGCGG CTACTTCGCG CAGGCCAACG CGGAATACGG TACGCCGATC
GGCAGTACGC AGTACTACAA GGCCGACATC AACGCGCAGT ACTATTACTC GTTTGCGCGC
GGTTTCGTGC TCGGTTTCAA CTTCCAGGGT GGCTACGGCA AGGGTATGGG CGGCAAGCCG
TATCCGATTT TCAAGAACTA CTACGCTGGC GGTATCGGTT CGGTGCGTGG CTACGAGCCG
AGTTCGCTGG GCCCGCGCGA TGCAACGACG AACGACCCGA TTGGCGGCTC GAAACTGCTC
GTGGGTAACA TCGAGTTGAC GTTCCCGTTG CCTGGCACCG GTTACGATCG AACGCTGCGT
GTGTTCACGT TCCTCGACGC CGGTAACGTC TGGGCGGATG CAAGCAGCGC CGCTACGTCG
ACCGGCGCGA ACGGTCTGCG CTACGGCTAC GGTATCGGCC TTGCATGGAT TTCCCCTATC
GGCCCGTTGA AACTGAGCCT GGGCTTCCCG CTTGTGAAGC ACACCGGCGA CCAGTACCAG
AAATTCCAGT TCCAGATCGG GACGGCATTC TGA
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| Protein sequence | MFKPHRFVPK TVIAAAFAAH GLVAHATTPF VVQDIRIEGL QRVEPGTVFA YLPIKQGDTF
SDDKASEAIR ALYATGFFND VKIATEGNVV IVQVLERPAI GTIDFAGIHE FDKENLTKAL
RAVGLSQGRY YDKALVDKAE QELKRQYLTR GYYAAEVTTT ITPIDRNRVS VLFAVAEGPS
AKIRQINFIG NKAFSTGTLR DEMQLSTPNW FSWYTKNDLY AKDKLTGDLE NVRSYYLNRG
YLEFNIESTQ VSITPDKKDM YLTVTLHEGE PYTISNIKLA GNLLDREPEL AKLIKIKPGD
RFSAEKLQAT TKAIVDKLGE YGYAFATVNA QPQIDQANHK VDLTLQVDPS RRVYVRRINV
VGNTRTRDEV VRREMRQLES SWFDSNRLAL SKDRINRLGY FTDVDVTTVP VEGTPDQVDV
DVKVAEKPTG AITLGAGFSS TDKVVLSAGV SQDNVFGSGT SLSVNVNTAK TYRTLTVTQV
DPYFTVDGIK RITDVYYRTY QPLYYSTDSS FKIVTIGGDL KFGIPFSEVD TVYFGAGLEQ
NQLDVDANTP ASYRQYVQDF GRVSNNVPIT VGWSRDARDS ALVPSRGYFA QANAEYGTPI
GSTQYYKADI NAQYYYSFAR GFVLGFNFQG GYGKGMGGKP YPIFKNYYAG GIGSVRGYEP
SSLGPRDATT NDPIGGSKLL VGNIELTFPL PGTGYDRTLR VFTFLDAGNV WADASSAATS
TGANGLRYGY GIGLAWISPI GPLKLSLGFP LVKHTGDQYQ KFQFQIGTAF
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