Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2446 |
Symbol | |
ID | 6282077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2756263 |
End bp | 2756790 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642622000 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_001896066 |
Protein GI | 187924424 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.197703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00284352 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTTTGT TAACCGGTAT GTTTTCGAAA CGTGTGGCGT GCGCGCTGGC GCTGGCAATG ACCTTGGGTG TCGGGGTCGC GCATGGGCAG GAGGCGAGGA TCGCGGCGGT GAATTCCGAC CGCATCCTGC GCGAATCCGC TGCCGCGAAG GCCGCGCAGG TCAAGCTCGA GGCCGAGTTC GCCAAGCGTG ACAAGGACCT TGCCGACATG GCGCAGAAGC TGAAGTCGAT GTCCGATTCG CTCGACAAGA ACGGTGCGTC CATGTCGCCC GCCGACCGCG CGCAGAAGCA GCGCGATCTG TCGCAACTGG ACACGGACTT CCAGCGCAAG CAACGCGAGT TTCGCGAGGA TCTGAATCAG CGCCGCAACG AAGAACTGGC GGCGGTGCTC GACCGCGCCA ACAAGGTGAT CAAGCAGATT GCCGAGGCGC AGCACTACGA TCTGATTGTC CAGGAAGCGG TGTACGTGAG CCCGCGCATC GATATTACCG ATCAGGTGCT CAAGGCTTTG GCGGCATCGG GTAACTGA
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Protein sequence | MTLLTGMFSK RVACALALAM TLGVGVAHGQ EARIAAVNSD RILRESAAAK AAQVKLEAEF AKRDKDLADM AQKLKSMSDS LDKNGASMSP ADRAQKQRDL SQLDTDFQRK QREFREDLNQ RRNEELAAVL DRANKVIKQI AEAQHYDLIV QEAVYVSPRI DITDQVLKAL AASGN
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