Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2441 |
Symbol | rnhB |
ID | 6284041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2751556 |
End bp | 2752302 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642621995 |
Product | ribonuclease HII |
Protein accession | YP_001896061 |
Protein GI | 187924419 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0813221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0206101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTGT CACGCGCGCC GCGCCGTAAA ACCGTCGCAG GAGCGTCGGC GCAACAGGTC GGCCTGAACT TCGAGACGCC GGATGACATC GTCTGCGGCG TCGACGAAGC AGGGCGTGGC CCGTTGGCCG GCCCAGTCGT GGCCGCGGCG GTGATTTTCG ACCCGTCCAA ACCGATGATT CGCGGCCTCG ACGATTCCAA AGTATTGACC GCGAAAAAGC GCGACGAACT GTACGACAAG ATCGTCGACC GCGCGCTCGC TTACTGCATC GCTTCGGCCA CCGTCGAAGA AATCGATTCT CTGAATATCC TGCACGCGAC CATGCTGGCC ATGAAGCGCG CCGTCGAAGG CCTGTCCGTC GTGCCGACGC TCGTCAAGAT CGACGGCAAT CGCTGCCCGA CACTGAGCGT GCGCAGCGAA GCGGTGATCG GCGGCGACGC GCTCGTCAAA AGCATTTCGG CGGCGTCGAT TCTCGCCAAA GTCACGCGCG ACCGGATGCT GCTCGAATTG CATCAGACGC ATCCCGTCTA CGGCTTCAAC GCGCATGCCG GTTACGGCAC GCCGCAGCAT CTCAAGGCGC TGCGCGAACA TGGACCTTGC GAGCATCATC GGCGTTCGTT CGCGCCGGTG CGTGAGGCGC ATCTGCGCCT GAGCACGGGC ATGCCGCTGC CGGCCGGTGA AGTGATCGTC GTATCCGAAG TGATGTTCGA CGACGACGCC TTCGGCGAAC GCGGCAGCGC CGTCTGA
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Protein sequence | MTLSRAPRRK TVAGASAQQV GLNFETPDDI VCGVDEAGRG PLAGPVVAAA VIFDPSKPMI RGLDDSKVLT AKKRDELYDK IVDRALAYCI ASATVEEIDS LNILHATMLA MKRAVEGLSV VPTLVKIDGN RCPTLSVRSE AVIGGDALVK SISAASILAK VTRDRMLLEL HQTHPVYGFN AHAGYGTPQH LKALREHGPC EHHRRSFAPV REAHLRLSTG MPLPAGEVIV VSEVMFDDDA FGERGSAV
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