| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2438 |
|---|
| Symbol | |
|---|
| ID | 6284038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2746801 |
|---|
| End bp | 2749206 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642621992 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_001896058 |
|---|
| Protein GI | 187924416 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0972203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0321023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACG CAGTTACCGT CGCAAAGGAT AAGGCGTATG TAGTTCCGTT TGAGCAGTTG
CGGATGACCG ACGTGGAAAT CGTCGGTGGC AAGAACGCGT CGCTTGGCGA GATGATCAGT
CAGCTCGCCG AGGCCGGCGT GCGCGTGCCG ACCGGTTTCG CCACCACGGC GCTGGCTTTC
CGCGACTTCC TGCATCACAA CAACCTGACC GAACGCATTG CCAAACGTCT CGAGACGCTC
GACGTCGACG ACGTGAAGTC GCTTGCCGAA GCGGGCAAGG AAATCCGCCA ATGGATCGTC
GACGCGCCGT TCCAGCCACA ACTCGAGGCG GATATCCGCG CGGGCTTCGA CACCCTGCAA
AACAGCTCGC CTGAAGAGCT GTCGTTCGCC GTGCGTTCGT CGGCCACGGC GGAAGACTTG
CCGGACGCAT CGTTCGCGGG TCAGCAGGAA AGCTACCTCA ACGTGGTCGG TGTGGAAGAC
GTGCTCGATC GCATGAAGCA CGTGTTCGCT TCGCTATACA ACGACCGCGC TATCTCCTAT
CGCGTCCACA AGGGCTTCAC GCACGCTGAA GTCGCGTTGT CGGCGGGTGT GCAGCGCATG
GTGCGCTCGG ACGTCGGCGC GGCCGGCGTG ATGTTCACGC TGGACACGGA ATCGGGCTTC
AAGGACGCTG TCTTCATCAC GTCGAGCTAT GGTCTGGGCG AAACCGTGGT GCAAGGCGCG
GTGAATCCGG ACGAGTTCTA CGTCTACAAG ACCACGCTCG CGCAAGGCAA GTACCCGATC
ATCCGCCGCT CGATCGGCTC GAAGCTGATC AAGATGGAAT TCACCAAGGC GGGCGAAGAA
GGCCGCGTGA AGACCGTCGA CGTGGCGCAC GAGCAGCGCA ACCGCTTCTC GATCACGGAC
GAAGACGTGA TCGAACTGGC CAAATACGCC GTCATCATCG AAAAGCACTA CGAGCGTCCG
ATGGACATCG AGTGGGGCAA GGACGGCCGC GACGGCAAGA TCTTCATTCT GCAGGCGCGT
CCGGAAACGG TGAAGAGCCA GGCGGCGGGC AAGGCCGAAC AGCGTTTCAA GCTGAAGGGT
CAGTCGAACG TGCTGGCCAC CGGCCGCGCA ATCGGTCAGA AGATCGGTGC GGGTCCGGTG
CGCGTGATTC ACGATCCGTC GGAAATGGAC CGTGTGCAGC CGGGCGACGT GCTGGTCGCC
GACATGACCG ACCCGAACTG GGAACCGGTC ATGAAGCGCG CGTCGGCAAT CGTCACGAAT
CGTGGCGGCC GGACCTGTCA CGCGGCGATT ATTGCGCGTG AGCTGGGCGT GCCGGCGGTG
GTCGGCTGCG GCGACGCGAC CGACGTGCTG AAGGAAGGCG CGCTGGTCAC GGTATCGTGC
GCGGAAGGCG ACGAAGGCAG GATCTACGAC GGTCTGCTCG AAACCGAAGT TACCGAAGTG
CAGCGCGGCG AACTGCCGCC GATTCCGGTG AAGATCATGA TGAACGTGGG CAACCCGCAA
CTGGCCTTCG ACTTCTCGCA ACTGCCGAAT GCAGGCGTGG GTCTCGCGCG GCTCGAGTTC
ATCATCAACA ACAACATCGG CGTTCACCCG AAGGCGATTC TCGAGTACCC GAACATCGAT
CAGGACCTGA AGAAGGCCGT GGAAAGCGTC GCTCGCGGGC ACGCCTCGCC GCGCGCGTTC
TACGTCGACA AGCTGACCGA AGGGATCGCC ACGATCGCGG CGGCGTTCTA TCCGAAGCCC
GTGATCGTGC GTCTGTCGGA TTTCAAGTCG AACGAGTACA AGAAGCTGAT CGGCGGTTCG
CGCTACGAGC CGGACGAAGA AAACCCGATG CTGGGTTTCC GCGGCGCGTC GCGCTACATC
GCGGACGATT TCGCCGAAGC GTTCCAGATG GAATGCATCG CGTTGAAGAA GGTGCGCGAA
GAGATGGGCC TCGACAACGT TGAGATCATG GTGCCGTTCG TGCGTACGCT GAAGCAGGCG
GAACGCGTGG TCGGGCTGCT GGCCAAGTAC GGCCTGAAGC GCGGCGAGAA TGGCCTGCGC
CTGATCATGA TGTGCGAAGT GCCGTCGAAC GCGATTCTCG CTGAGGAATT CCTGCAATTC
TTCGACGGTT TCTCGATCGG CTCGAACGAC CTGACGCAGC TCACGCTCGG CCTCGACCGC
GACTCCGGTA TGGAACTGCT GGCGGTGGAT TTCGACGAAC GCGATCCGGC AATCAAGTTC
CTGTTGAAGC GCGCGATCGA CACGTGTCTG CGACTGGACA AGTACGTCGG TATCTGCGGC
CAGGGCCCGT CGGATCATCC GGATTTCGCG CAATGGCTGA CCGATGAAGG CATCAAGTCG
ATCTCGCTGA ACCCTGACAC GATCGTCGAG ACGTGGCAGC AACTGGCGAA GTCGGCGAAG
CAGTAA
|
|---|
| Protein sequence | MTNAVTVAKD KAYVVPFEQL RMTDVEIVGG KNASLGEMIS QLAEAGVRVP TGFATTALAF
RDFLHHNNLT ERIAKRLETL DVDDVKSLAE AGKEIRQWIV DAPFQPQLEA DIRAGFDTLQ
NSSPEELSFA VRSSATAEDL PDASFAGQQE SYLNVVGVED VLDRMKHVFA SLYNDRAISY
RVHKGFTHAE VALSAGVQRM VRSDVGAAGV MFTLDTESGF KDAVFITSSY GLGETVVQGA
VNPDEFYVYK TTLAQGKYPI IRRSIGSKLI KMEFTKAGEE GRVKTVDVAH EQRNRFSITD
EDVIELAKYA VIIEKHYERP MDIEWGKDGR DGKIFILQAR PETVKSQAAG KAEQRFKLKG
QSNVLATGRA IGQKIGAGPV RVIHDPSEMD RVQPGDVLVA DMTDPNWEPV MKRASAIVTN
RGGRTCHAAI IARELGVPAV VGCGDATDVL KEGALVTVSC AEGDEGRIYD GLLETEVTEV
QRGELPPIPV KIMMNVGNPQ LAFDFSQLPN AGVGLARLEF IINNNIGVHP KAILEYPNID
QDLKKAVESV ARGHASPRAF YVDKLTEGIA TIAAAFYPKP VIVRLSDFKS NEYKKLIGGS
RYEPDEENPM LGFRGASRYI ADDFAEAFQM ECIALKKVRE EMGLDNVEIM VPFVRTLKQA
ERVVGLLAKY GLKRGENGLR LIMMCEVPSN AILAEEFLQF FDGFSIGSND LTQLTLGLDR
DSGMELLAVD FDERDPAIKF LLKRAIDTCL RLDKYVGICG QGPSDHPDFA QWLTDEGIKS
ISLNPDTIVE TWQQLAKSAK Q
|
|---|
| |