Gene Bphyt_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2436 
Symbol 
ID6284175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2745185 
End bp2746117 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content61% 
IMG OID642621990 
Productband 7 protein 
Protein accessionYP_001896056 
Protein GI187924414 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0177964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0711842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCGA CCATCGTCGG GGCGGTGCTT CTGATCATCG TGATCGTACT GGCGGCGCAG 
ACCATCAAGA TCGTGCCGCA GCAGCATGCG TGGGTTCTGG AGCGACTCGG CCGCTATCAC
CGTACGCTGA CACCGGGGTT GAGCTTTGCG TTTCCGTTCG TCGATCGGAT CGCCTATAAG
CACATCCTCA AGGAAATTCC GCTCGAAGTG CCGAGCCAGG TCTGTATCAC GCGCGACAAC
ACGCAGTTGC AGGTGGACGG CGTGCTGTAC TTTCAGGTCA CCGATCCCAT GAAGGCGTCG
TACGGGTCGA GCAACTTCGT GTTCGCGATC ACGCAGTTGT CGCAAACCAC GCTGCGCTCG
GTGATCGGCA AGCTCGAACT CGACAAGACC TTTGAGGAGC GCGACTTCAT CAACCACAGC
ATCGTGTCGT CGCTCGATCA AGCCGCGACG AACTGGGGTG TGAAGGTGCT GCGCTACGAG
ATCAAGGACC TGACGCCGCC CAAGGAAATT CTCCACGCGA TGCAGGCGCA GATCACCGCC
GAGCGCGAGA AGCGCGCGCT GATCGCCGCT TCGGAAGGGC GCAAGCAGGA GCAGATCAAC
ATCGCGTCCG GCGGTCGTGA GGCGGCGATC CAGAAGTCCG AAGGCGAGCG GCAGGCAGCG
ATCAATCAGG CGCAAGGTCA GGCGTCGGCG ATTCTGGCCG TGGCCGAGGC CAACTCGCAG
GCGATCCAGA AGATCGCGGC GGCGATTCAA TCGAACGGCG GGATGGAAGC GGTGAACCTC
AAGGTGGCCG AACAATACGT GAACGCGTTC GGCAATCTGG CGAAGCAGGG CACCACGCTG
ATCGTGCCGG GCAATCTCGC GGACATGAGC TCGATGATCG CCTCGGCGCT GACGATTGTG
AATAAAGGGA AGGGCGTGAG CGAGGTGCGT TGA
 
Protein sequence
MDSTIVGAVL LIIVIVLAAQ TIKIVPQQHA WVLERLGRYH RTLTPGLSFA FPFVDRIAYK 
HILKEIPLEV PSQVCITRDN TQLQVDGVLY FQVTDPMKAS YGSSNFVFAI TQLSQTTLRS
VIGKLELDKT FEERDFINHS IVSSLDQAAT NWGVKVLRYE IKDLTPPKEI LHAMQAQITA
EREKRALIAA SEGRKQEQIN IASGGREAAI QKSEGERQAA INQAQGQASA ILAVAEANSQ
AIQKIAAAIQ SNGGMEAVNL KVAEQYVNAF GNLAKQGTTL IVPGNLADMS SMIASALTIV
NKGKGVSEVR