| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2416 |
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| Symbol | |
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| ID | 6283361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2719495 |
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| End bp | 2720808 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621970 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001896036 |
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| Protein GI | 187924394 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.975538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAA CCAACACAAC GGAGCGTCCC GAGGGCCGCG CGGCGGCCGC GAAGCATGAA
GCGGCAACGG CAAACGGTGC TGTTGAAAAC GCACCCAATC CGCGCAAGCG CAAGGTGCTG
CTCGCGCTGC TTGGCGTGGC TGTCGTCATG TCGGCGGCGG CCTATGGTGC TTACTACATG
ACCTATGCGC GCTATCACGA ATCAACCGAC GACGCATACG TCAGCGGCAA TCTCGTGCAA
CTCACGCCGC AGGTCACGGG CACGGTCGTC GCGGTGAACG CCGACGATAC GCAGATCGTC
AGGGCCGGCG ACCCGGTGGT CACGCTCGAC GTTGCCGACG CGAAGGTCGC GCTCGGCAAC
GCTGAAGCAA ACCTGGGCCA GACCGTGCGG CAGGTGAGCA GCCTGTACGT GAACAACCAT
TTCTACGCCG CGAATGTGGC GCAGAAGCAA TCCGATCTGG TCCGCGCGCA GGCCGATCTG
CGGCGCCGCC AGGGCGTCGC CGATATGGGC GCCGTATCGG CCGAGGATAT CGCGCACAGC
CGCGACGCCG TGACGGCCGC ACAGGCCGCC CTCGACGCCG CGCATCAACA GGCCGAAGCT
AATCGCGCGC TGACCGATCT CACCACGATC GAACAGCATC CCAATGTGCA GGCCGCCGCG
TCGAAAGTGC GTGACGCCTA TCTCGGCTAT GCGCGCAACA CGTTGCCCGC GCCCGTCACC
GGCTATGTCG CGAAGCGTGC GGTGCAGGTC GGGCAGCGCG TGTCGCCGGG CACGCCGTTA
ATGGCGATTG TGCCGCTCGA CGGCGTGTGG GTGGATGCGA ACTACAAGGA AAACCAGTTG
CGCAATATGC GCATCGGTCA ACCTGTCACG CTGACGGCCG ATGTGTACGG CGGCAAGGTC
AAGTATCACG GCCGGGTGGT GGGGTTCTCC GCAGGCACGG GCAGCGCGTT TGCGAGCTTG
CCTGCGCAGA ATGCGACGGG AAACTGGATC AAGATTGTCC AGCGTCTGCC CGCGCGCATC
CAGCTCGATC AGAAGGAACT CGAAGCGCAT CCGCTGCGGA TCGGCCTCTC GATGGATGTC
GACGTGGATA CCCGCGACAA CACGGGCCCG CAACTCGGCG CGGCGACGAA GACGTCGTAT
CGCACGGATG TATTCGCCGA ATACGGCGCG CAAGCCGATG CGGAGATCGA GAAGATCATC
GCGCGAAACA TCGTCCCGTT GCATGCGGGA TCCACAGGCA ACGTTGCATC GTCGATGCCA
TCCGCGAAGC GCGAGGCAGG CGACAGGAGC AGCACCAGAC AGCGCGCGGG CTAG
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| Protein sequence | MSETNTTERP EGRAAAAKHE AATANGAVEN APNPRKRKVL LALLGVAVVM SAAAYGAYYM
TYARYHESTD DAYVSGNLVQ LTPQVTGTVV AVNADDTQIV RAGDPVVTLD VADAKVALGN
AEANLGQTVR QVSSLYVNNH FYAANVAQKQ SDLVRAQADL RRRQGVADMG AVSAEDIAHS
RDAVTAAQAA LDAAHQQAEA NRALTDLTTI EQHPNVQAAA SKVRDAYLGY ARNTLPAPVT
GYVAKRAVQV GQRVSPGTPL MAIVPLDGVW VDANYKENQL RNMRIGQPVT LTADVYGGKV
KYHGRVVGFS AGTGSAFASL PAQNATGNWI KIVQRLPARI QLDQKELEAH PLRIGLSMDV
DVDTRDNTGP QLGAATKTSY RTDVFAEYGA QADAEIEKII ARNIVPLHAG STGNVASSMP
SAKREAGDRS STRQRAG
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