Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2372 |
Symbol | |
ID | 6283396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2666142 |
End bp | 2667197 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621928 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_001895994 |
Protein GI | 187924352 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACTC TCGTCAAAAC ACAAAACGTC GCACTCGCAA TACTAGCCGC AGCCGCTTTG ACCACCGTGA CCACCCAGGC AGCGGAGACG CTTTCCGTCG TGACCTTCGG CGGTGCATAC GAAGCGGCGG CAAAGAAGGC TTATTTCGAA CCGTTCACCC AGGCCACCGG CATCGGCTTC TCGACGGAAT CGTATGACGG CGGCCTCGCG AAACTTTCCG CGATGGAGCA GGCGAAGAAC ACCACGTGGG ATCTGATCGA CCTCGAAACA AACGACGCGA TCACCGCCTG CGACGAAGGC CTCCTGCAGA AGTTCGACAA GAAGACGATC GGCAAGACGA GCGACTTCAT TCCCGGCACG ATCAGCGATT GCGCGGTGGC GAGCATGGTC TGGTCGACGA TCTACGCGTA CGACGCGAGC AAGCTCAAGA GCGCCCCGAC CACCGTCAAC GACTTCTTCG ATCTGCAGAA ATTCCCGGGC AAGCGCGGCT TGCGCAAATC GCCGAAGGTC ACGATGGAAT GGGCGCTGAT TGCGGATGGC GTCGATCCCA AGGATGTCTA CAAAGTACTT GGAACACCTG CCGGCGTGGA TCGCGCGTTC AAGAAGCTGG ACACGATCAA ACCGAACATC GTGTGGTGGG AGTCGGGTGC GCAGGCGCCG CAGTTGCTCG CTGACGGCGC GGTCGTGATG ACGCAGGCCT ACAACGGCCG CATTTCCGGC GCCGCGAAGA AGGACAACAA GCCGTTCAAG ACCGTGTGGG ACGCGCAGGT CTACGACTTC GACTGGTGGG CCGTTCCGAC GGGCGCGAAG CACGCCGATG CCGCCGCGAA GTTCATCGCC TCCGCTTCGC AGCCGAAGGC GTATGCGGAT CTGTCGAAGT ACATCGCCTA CGCGCCGCCG CGCAAGGACG CGATCGCGCT GATCGACAAG CAGCGCCTCG CCGATCTGCC GACCGCGCCC GACAACTTCA AGCGCGCCTT GCAGATCAAC GCGAATTTCT GGGCCGACAA CGCGGACCAG ATCAACAAGC GCTTCCAGGT GTGGCTGACG CAGTAA
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Protein sequence | MRTLVKTQNV ALAILAAAAL TTVTTQAAET LSVVTFGGAY EAAAKKAYFE PFTQATGIGF STESYDGGLA KLSAMEQAKN TTWDLIDLET NDAITACDEG LLQKFDKKTI GKTSDFIPGT ISDCAVASMV WSTIYAYDAS KLKSAPTTVN DFFDLQKFPG KRGLRKSPKV TMEWALIADG VDPKDVYKVL GTPAGVDRAF KKLDTIKPNI VWWESGAQAP QLLADGAVVM TQAYNGRISG AAKKDNKPFK TVWDAQVYDF DWWAVPTGAK HADAAAKFIA SASQPKAYAD LSKYIAYAPP RKDAIALIDK QRLADLPTAP DNFKRALQIN ANFWADNADQ INKRFQVWLT Q
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