Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2332 |
Symbol | |
ID | 6283443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2630313 |
End bp | 2631053 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642621889 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001895955 |
Protein GI | 187924313 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.738063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGACA CAGACTCCGC CGCTGCGAAT AGTTCGAAAC CCGAAGCGAT CGCCGAGCGC ATCCGCGCGG CGATCCTCGA GCATCGGCTC GCGCCGGGCG CCAAGTTGAC AGAAGCCCAG TTGTGCGAAG TATTCGGTGT GAAGCGCGGC CCGATCCGGC AGGCGCTGGC GCAGTTGGCC ACCGACCACC TTGTCGATCT CGAACCGAAT CGCGGAGCGT TCGTGGCAAG TCCGTCGCTG CAGGAAGTGC ACGAAGTGTT CGAGATGCGT CGCATCATCG AGCTTGCGGT GGTCGAAAAG ATCTGCAGCG GCCACGGCAT GCGGCGGTTG AAGAGCATCG GCAGCATGAT CGGCCGGGAA CGCAAAGCGT TTGAAACACG TGATTTTCCA GCGTGGATTC GTCTGTCGGG CGAGTTTCAC ACCGAGTTGG CGGGCCTCAC GGGCAACGCC GTGTTGTGCG ACTGCCTGAA CGGCCTGGTA GCGCGCTCCA CGCTGATTTC CGCGCTGTAC GAGTCGCTCG GACGCAGCCC ATGCTCGTTC GAGGACCACG AAGCTATTCT CGCCGCGCTC GACGCCGGCG ATGCAAAAGA GGCGGCGGCA TTGATGTCGC GCCATTTGCA AAGCGTCGAG TTGAAGATGC TGGACCGCCC CGCACGCGGC GCGGCCGATC TGCATGAAGT GTTCGGCGCA CTCAACGGTG CAGCCAGAGA TTCATCGAAG ACCAAGTCCG CGCCAGGCTG A
|
Protein sequence | MSDTDSAAAN SSKPEAIAER IRAAILEHRL APGAKLTEAQ LCEVFGVKRG PIRQALAQLA TDHLVDLEPN RGAFVASPSL QEVHEVFEMR RIIELAVVEK ICSGHGMRRL KSIGSMIGRE RKAFETRDFP AWIRLSGEFH TELAGLTGNA VLCDCLNGLV ARSTLISALY ESLGRSPCSF EDHEAILAAL DAGDAKEAAA LMSRHLQSVE LKMLDRPARG AADLHEVFGA LNGAARDSSK TKSAPG
|
| |