| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2296 |
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| Symbol | |
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| ID | 6284497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2587535 |
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| End bp | 2590036 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621853 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_001895919 |
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| Protein GI | 187924277 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCA TCAAACGACC GCATTCATCC AATTCTCCGT CTGGTGAAGA CCGGGATTCC
TACCAACGCA CGCCAGGACG CAATGCAGCT TCGCGCGATG CCGAGGCCGG CCGCCGTTCC
CTTGGCACGA CGCTCGTCAT CTGGTTCGCC AGCCTGCTCG CGACCATCGC GGTGGTGGGC
GCGCTGATCG TTGGCTATGC ACTCGTGGTG ATGGGGCCGC AACTGCCGTC GCTCGACGCG
CTGACCGACT ATCGTCCGAA GGTGCCGCTG CGGGTCTATA CGGCGGACCA CGTGCTGATC
GGCGAATTCG GCGAGGAGCG GCGCTCGCTC GTGCGCTTCC AGGACATTCC CGATCAGATG
AAGAAAGCGG TGCTCGCGAT CGAAGACTAT CGCTTCTACG AGCATGGCGG CGTCGACTTC
ATCGGCATTC TGCGGGCGGG TGTCTCCGAC CTCTCGCACG GCGGCGCCTC GCAGGGCGCG
AGCACGATCA CCATGCAGGT GGCGCGCAAC TTCTTCCTCT CCAGCGAGAA GACCTACACG
CGCAAGATTT ACGAAATGCT GCTCGCGTAC AAGATCGAGC GCGCGCTGAC CAAAGATCAG
ATTCTCGAGC TGTACATGAA CCAGATCTAT CTGGGCGAAC GCGCTTATGG TTTTGCCGCG
GCCGCGCGCG TGTACTTCGG TAAGGATCTG AAGGACATCA CGCTGGCGGA ATCGGCAATG
CTGGCCGGCT TGCCGAAGGC GCCGTCCGCG TATAACCCGG TGGTCAATCC GAAGCGCGCG
AAGATCCGTC AGGAGTACAT TCTGCGGCGC ATGCTCGAAC TGAAATACAT CAGCCAGGAT
CAGTACGATC AGGCTGTGAA GGAAGAGATT CACACCAAGA ATCCGGGCAA CGAATATAGC
GTGCACGCCG AGTACATTGC CGAAATGGTC CGGCAGATGA TGTACGCCCA ATACAAGGAC
GAAACCTACA CGCGCGGCCT GAACGTCACC ACCACGATCG ACTCCGCGGA TCAGGACGCC
GCTTATCGCG CGGTGCGCAA GGGCGTGATG GATTACGAGC GGCGCCATGG CTATCGCGGG
CCTGAAGGTT TCGTGCAACT GCCCGCGCCG GGCGACGACC GCGACCAGAC TATCGACGAC
GCGCTCACCG ATCACCCGGA CAACGGCGAG ATCATCGCCG CCGTGGTGAC GGAGGCGGCT
CCGAAGCAGG TCAAGGCGCA ACTCGTGGAC GGAACGCAGG TGACGATCAG TGGCGACGGC
CTGCGTTTTG CCGCCGGCGC ATTGAGCGCG CGCGCCACGG CCGCCACGAA GATCAAGGTC
GGCTCGATCG TGCGCCTCAT CGCGGACGAC AAGGGCAACT GGCAGATCAC GCAACTGCCG
CAAGTGGAAG GCGCGCTGGT GTCGCTCACG CCGCAGGACG GCGCGATTCG CGCGCTGGTG
GGCGGCTTCG ACTTCAACAA GAACAAGTTC AACCACGTCA CGCAGGCGTG GCGTCAGCCG
GGTTCGAGCT TCAAGCCGTT CATCTATTCG GCTGCGCTCG ACAAGGGTCT CGGACCGGCC
ACGATCATCA ACGACGCGCC GTTGTACTTC CCGTCGAGCA CGCCGGGCGG CGATGCGTGG
GAGCCGAAGG ACGACGACCA GCCGGACGGT CCGATGCCTA TGCGTCTCGC GTTGCAGAAG
TCGAAGAACC TCGTGTCGAT CCGCATTCTG TCGTTCATCG GCACCAAGTA CGCGCAAGAC
TTCGTCACGC AGCGTTTCGG TTTCGACGCC GACAAGACCC CGCCATATCT GCCGATGGCG
CTCGGTGCGG GCCTCGTCAC GCCGTTGCAG TCGGCGGGTG CGTATTCGGT GTTCGCGAAC
GGCGGCTTCC GGATCAATCC GTATCTGATC AACGAGGTCA CGGACGCGCG CGGCCAACCG
CTCTCCAAGG CGCAGCCGCT GACGGCCGGG CGCGATGCGC CGCGCACGCT GGAACCGCGT
AACGCCTACA TCATGAACAG TCTGCTGCAT TCGGTGGCCA CGGCCGGCAC GGGCGCGGGC
ACCAACGCGC TGCACCGTAC CGACTTGCAG GGCAAGACTG GTACGACCAA CGACGCGAAA
GATGGCTGGT TCGCCGGTTA TCAGCAGTCG CTGGTGGCGG TGGCGTGGAT GGGCTACGAC
CAGCCGAAGA GCCTCGGCAG CCGCGAATTC GGCGCGCAAC TGGCATTGCC GATCTGGGTG
GAATACATGC AGCGCGCGCT GCGCGGGGTG CCGCAAAGCG AACCGGCGCA ACCGGACGGC
GTGACTTCCG TCGACGGTGA ACTGTTCTAT ACGGATATGA CGCCGGGCAA TGGCTTCGTC
GCCAGCATCG GTCTGGACTC GGCGAATCCG ACCGCCGGCG TGAGCGATGC GGTCGGTGGC
GTCGGCCCTG CGGGAATGAC ACCGCCGGCG GTGCCGCCGC CGAGTGTCTC GTCGAATGAG
AAGAAGCAGA TCATGGATCT GTTCGAATCG AACAAGCCGT GA
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| Protein sequence | MPIIKRPHSS NSPSGEDRDS YQRTPGRNAA SRDAEAGRRS LGTTLVIWFA SLLATIAVVG
ALIVGYALVV MGPQLPSLDA LTDYRPKVPL RVYTADHVLI GEFGEERRSL VRFQDIPDQM
KKAVLAIEDY RFYEHGGVDF IGILRAGVSD LSHGGASQGA STITMQVARN FFLSSEKTYT
RKIYEMLLAY KIERALTKDQ ILELYMNQIY LGERAYGFAA AARVYFGKDL KDITLAESAM
LAGLPKAPSA YNPVVNPKRA KIRQEYILRR MLELKYISQD QYDQAVKEEI HTKNPGNEYS
VHAEYIAEMV RQMMYAQYKD ETYTRGLNVT TTIDSADQDA AYRAVRKGVM DYERRHGYRG
PEGFVQLPAP GDDRDQTIDD ALTDHPDNGE IIAAVVTEAA PKQVKAQLVD GTQVTISGDG
LRFAAGALSA RATAATKIKV GSIVRLIADD KGNWQITQLP QVEGALVSLT PQDGAIRALV
GGFDFNKNKF NHVTQAWRQP GSSFKPFIYS AALDKGLGPA TIINDAPLYF PSSTPGGDAW
EPKDDDQPDG PMPMRLALQK SKNLVSIRIL SFIGTKYAQD FVTQRFGFDA DKTPPYLPMA
LGAGLVTPLQ SAGAYSVFAN GGFRINPYLI NEVTDARGQP LSKAQPLTAG RDAPRTLEPR
NAYIMNSLLH SVATAGTGAG TNALHRTDLQ GKTGTTNDAK DGWFAGYQQS LVAVAWMGYD
QPKSLGSREF GAQLALPIWV EYMQRALRGV PQSEPAQPDG VTSVDGELFY TDMTPGNGFV
ASIGLDSANP TAGVSDAVGG VGPAGMTPPA VPPPSVSSNE KKQIMDLFES NKP
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