| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2263 |
|---|
| Symbol | |
|---|
| ID | 6283641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2552694 |
|---|
| End bp | 2553656 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621820 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001895886 |
|---|
| Protein GI | 187924244 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC GCATTCGCCG CCGCATCCTG ACGGCCGCCG TCCTCGCTAC CGCTACCGCC
GCCTTGCCGT TGTCCTCCGC TTACGCGCAG AGCGCGCCGG CTCATAAGCC GAAGGTGGCG
CTGGTGATGA AGTCGCTCGC CAACGAGTTC TTCCTCACGA TGGAGACCGG CGCGAAGGAC
TATCAGAAGC ACAACCCGTC GCAGTTCGAC CTGATCACCA ACGGCATCAA GGACGAGACC
GATACGGCGA ACCAGATCCG CATCGTCGAG CAGATGATCG TGTCGAAGGT CGACGCGATC
GTGCTGGCGC CGGCCGACTC GAAGGCGCTG GTGCCGGTCG TCAAGAAAGC GGTGGACGCG
GGCATCATCG TCGTGAACAT CGACAACCGG CTCGACCCGG AGGTGCTCAA GTCGAAAGAC
CTGAACGTGC CGTTCGTCGG CCCGGATAAC CGCAAGGGCG CGCAGAAGGT CGGCGACTAC
CTGGCGAAGA AGCTGAAGGC GGGCGACGAG GTCGGCATCA TCGAAGGCGT GTCGACTACT
ACCAACGCGC AGCAGCGCAC CGCGGGCTTC AAGGACGCGA TGCAGAAGGT CGGCGCCAAG
GTCGTCTCGG TGCAATCGGG TGAATGGGAA ATCGACAAGG GCAACGCGGT GGCCTCGGCC
ATGCTCAACG AGTATCCGAA CCTGAAGGCG CTCCTCGCCG GCAACGACAA CATGGCGATC
GGCGCGGTCT CGGCCGTGCG CGCAGCGGGC AAGCAAGGCA AGGTGCTGGT GGTCGGCTAC
GACAACATCA ATGCGATCAA GCCGATGCTC AAGGACGGCC GCGTGCTCGC CACCGCGGAT
CAGTACGCTG CCAAGCAAGC GGTGTTCGGT ATCGACACCG CGCTGAAGGC GCTCAGCGGA
CACAAGAAGC AGGCGGAACT CTCCGGCGTG GTGGAAACGC CGTGCGATCT GGTCACGAAG
TAA
|
|---|
| Protein sequence | MSQRIRRRIL TAAVLATATA ALPLSSAYAQ SAPAHKPKVA LVMKSLANEF FLTMETGAKD
YQKHNPSQFD LITNGIKDET DTANQIRIVE QMIVSKVDAI VLAPADSKAL VPVVKKAVDA
GIIVVNIDNR LDPEVLKSKD LNVPFVGPDN RKGAQKVGDY LAKKLKAGDE VGIIEGVSTT
TNAQQRTAGF KDAMQKVGAK VVSVQSGEWE IDKGNAVASA MLNEYPNLKA LLAGNDNMAI
GAVSAVRAAG KQGKVLVVGY DNINAIKPML KDGRVLATAD QYAAKQAVFG IDTALKALSG
HKKQAELSGV VETPCDLVTK
|
|---|
| |