Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2207 |
Symbol | |
ID | 6281328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2490845 |
End bp | 2491615 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642621765 |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | YP_001895831 |
Protein GI | 187924189 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTTGA ACATCGTGAA TCCCTTTGAT CTTTCCGGCC GCGTCGCGAT CGTCACCGGC AGCAATACGG GCCTCGGCGC CGGCATGGCC GTCGCACTCG CCGCAGCGGG TTGCGACATC GTCGGCGTGA GCCGCGCCGA CGCCGGCGAC ACCGCCGCGC GCGTCGAAGC ATGCGGACGG CGCTTCGCGG ACGTGCGCGC CGATCTCGGC TCGATTGCGC CGGTCGAGGA CATCGTGCGC GCCGCGCTCG AAGCGTTCGG CCGCGTCGAC GTGCTGGTGA ATAACGCGGG CATCATCCGC CGCGAGAACG CGCTCGATTT CACCGAAGCC GACTGGGACG CCGTGGTGGA CGTCAATCTG AAGAGCCTGT TCTTTCTCTC ACGGGCCGCC GCGCGACAGT TCGTGAAGCA GAAAAGCGGC GGCAAGATCA TCAACGTCGC GTCGATGCTG TCGTTCCAGG GCGGCATCCG CGTCGCGTCC TACACGGCGT CGAAAAGCGG TGTGCTGGGG CTCACGCGGC TGCTCGCGAA CGAATGGGCC GCGCAAGGCA TCAACGTCAA TGCGATTGCG CCGGGCTACA TGGCAACCGC GAACACGGCG GCGCTGCGCG ACGACGCCCA GCGCAACGAC GAGATTCTCA GCCGCATTCC GGCCGCCCGC TGGGGCACGC CGGACGATCT CGCGGGACCG GTGGTGTTCC TCGCGTCGCC GGCTTCGGAC TACGTGCATG GGCATACACT GGCGGTAGAC GGCGGCTGGC TCGCGCGCTG A
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Protein sequence | MGLNIVNPFD LSGRVAIVTG SNTGLGAGMA VALAAAGCDI VGVSRADAGD TAARVEACGR RFADVRADLG SIAPVEDIVR AALEAFGRVD VLVNNAGIIR RENALDFTEA DWDAVVDVNL KSLFFLSRAA ARQFVKQKSG GKIINVASML SFQGGIRVAS YTASKSGVLG LTRLLANEWA AQGINVNAIA PGYMATANTA ALRDDAQRND EILSRIPAAR WGTPDDLAGP VVFLASPASD YVHGHTLAVD GGWLAR
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